RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 BPIFA4PQ86YQ2 179 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 PERPQ96FX8 193 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 PMCHL2Q9BQD1 86 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 SETD2Q9BYW2 2564 aaPredicted RBP12.34□□□□□ -0.43
LMNB1-203ENST00000460265 C2orf70A6NJV1 201 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 BUB1B-PAK6H3BSN5 160 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 FCN3O75636 299 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 SPATA12Q7Z6I5 190 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 OR2K2Q8NGT1 345 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 WFDC12Q8WWY7 111 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 SSBP4Q9BWG4 385 aaPredicted RBP12.34□□□□□ -0.43
LMNB1-203ENST00000460265 DSCAML1Q8TD84 2053 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 PRSS46E5RG02 174 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 ASCL2Q99929 193 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 TMUB1Q9BVT8 246 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 THYN1Q9P016 225 aa12.34□□□□□ -0.43
LMNB1-203ENST00000460265 GGTLC3B5MD39 225 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 POU2AF1Q16633 256 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 C1orf159Q96HA4 380 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 DPM3Q9P2X0 92 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 SIGLEC9Q9Y336 463 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 C9JCJ5 164 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 LEPROTL1O95214 131 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 ATP6V0BQ99437 205 aa12.33□□□□□ -0.44
LMNB1-203ENST00000460265 HIST1H1EP10412 219 aaKnown RBP12.32□□□□□ -0.44
LMNB1-203ENST00000460265 CEACAM3P40198 252 aa12.32□□□□□ -0.44
LMNB1-203ENST00000460265 OR4A5Q8NH83 315 aa12.32□□□□□ -0.44
LMNB1-203ENST00000460265 MYO9AB2RTY4 2548 aa12.32□□□□□ -0.44
LMNB1-203ENST00000460265 OR10AG1Q8NH19 301 aa12.32□□□□□ -0.44
LMNB1-203ENST00000460265 JKAMPQ9P055 326 aa12.32□□□□□ -0.44
LMNB1-203ENST00000460265 RAB9AP51151 201 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 SYS1-DBNDD2H3BUS1 97 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 FCGR2BP31994 310 aaPredicted RBP12.31□□□□□ -0.44
LMNB1-203ENST00000460265 ZNF137PP52743 207 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 FOXA3P55318 350 aaPredicted RBP12.31□□□□□ -0.44
LMNB1-203ENST00000460265 TMEM97Q5BJF2 176 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 OSTCQ9NRP0 149 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 HIGD1AQ9Y241 93 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 LINC00173Q6ZV60 143 aa12.31□□□□□ -0.44
LMNB1-203ENST00000460265 IGHV3OR16-13A0A075B7E8 117 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 IGHV3-74A0A0B4J1X5 117 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 IZUMO1RA6ND01 250 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 A6NDN8 102 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 CKS1BP61024 79 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 ECSCRQ19T08 205 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 PRSS57Q6UWY2 283 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 PRNTQ86SH4 94 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 ISLRO14498 428 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 SPCS1Q9Y6A9 102 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 TRAV8-1A0A0A6YYK1 113 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 IL4P05112 153 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 ATP5IP56385 69 aaPredicted RBP12.3□□□□□ -0.44
LMNB1-203ENST00000460265 C19orf24Q9BVV8 132 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 LY96Q9Y6Y9 160 aa12.3□□□□□ -0.44
LMNB1-203ENST00000460265 TCTAP57738 103 aa12.29□□□□□ -0.44
LMNB1-203ENST00000460265 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
LMNB1-203ENST00000460265 MRPL32Q9BYC8 188 aaKnown RBP12.29□□□□□ -0.44
LMNB1-203ENST00000460265 PEX7O00628 323 aa12.29□□□□□ -0.44
LMNB1-203ENST00000460265 SEC11AP67812 179 aa12.29□□□□□ -0.44
LMNB1-203ENST00000460265 MAP1LC3CQ9BXW4 147 aa12.29□□□□□ -0.44
LMNB1-203ENST00000460265 SONP18583 2426 aaKnown RBP12.28□□□□□ -0.44
LMNB1-203ENST00000460265 TRAV26-1A0A087WT03 109 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 TMSB15BA0A087X1C1 80 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
LMNB1-203ENST00000460265 A0A0G2JLM5 398 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 ZNF207O43670 478 aaKnown RBP12.28□□□□□ -0.44
LMNB1-203ENST00000460265 TMEM249Q2WGJ8 235 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 GOLT1AQ6ZVE7 132 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 KAAG1Q9UBP8 84 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 A0A1W2PRE2 83 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 C9orf118A6NHY6 69 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 K7EP34 96 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 ADORA2A-AS1P86434 159 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 HSD52Q0P140 79 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 EXOC3-AS1Q8N2X6 119 aa12.28□□□□□ -0.44
LMNB1-203ENST00000460265 TCF24Q7RTU0 167 aa12.27□□□□□ -0.44
LMNB1-203ENST00000460265 SLC25A2Q9BXI2 301 aa12.27□□□□□ -0.44
LMNB1-203ENST00000460265 OR2J3O76001 311 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 COL8A1P27658 744 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 CRYBA4P53673 196 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 FAM168AQ92567 244 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 ZNF503Q96F45 646 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 EPG5Q9HCE0 2579 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 IGLV2-23P01705 113 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 UFSP1Q6NVU6 142 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 PATE2Q6UY27 113 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 SCRT2Q9NQ03 307 aa12.27□□□□□ -0.45
LMNB1-203ENST00000460265 SORL1Q92673 2214 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 ABCA12Q86UK0 2595 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 HLA-DRB1P01911 266 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 RUSC1-AS1Q66K80 236 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 STXBP6Q8NFX7 210 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 NPFFR1Q9GZQ6 430 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 LINC00574Q9H8X3 128 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 NBR2O15453 112 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 FAM162BQ5T6X4 162 aa12.26□□□□□ -0.45
LMNB1-203ENST00000460265 JMJD8Q96S16 334 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms