RNA–Protein interactions for RNA: ENST00000460110.5

NUDCD3-203, Transcript of NudC domain containing 3, humanhuman

TSL 1 (best)

Gene NUDCD3, Length 3,641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-203ENST00000460110 HIST3H2BBQ8N257 126 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 ZNF491Q8N8L2 437 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 LINC01356Q8N9X3 169 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 FXYD5Q96DB9 178 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 RABAC1Q9UI14 185 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 A8MWP6 167 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 TCF21O43680 179 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 ZNF664Q8N3J9 261 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 NAT8BQ9UHF3 227 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 EPDR1Q9UM22 224 aa7.34□□□□□ -1.23
NUDCD3-203ENST00000460110 A0A087WWC5 75 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 GRIFINA4D1Z8 144 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 GGCTO75223 188 aaKnown RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 TXNDC17Q9BRA2 123 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 PITPNC1Q9UKF7 332 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 IGLV11-55A0A075B6I3 123 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 J3QKU1 62 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 K7EN84 100 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 NPSP0C0P6 89 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 GBGT1Q8N5D6 347 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 KLK15Q9H2R5 256 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 TRAV30A0A087WSZ9 112 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 SNURFLB1AK76 121 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 BMPR1BO00238 502 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 CRYGCP07315 174 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 GZMBP10144 247 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 HIST1H1EP10412 219 aaKnown RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 SLC25A16P16260 332 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 HLA-DMBP28068 263 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 RPEL1Q2QD12 228 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 CIARTQ8N365 385 aaPredicted RBP7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 TMEM208Q9BTX3 173 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 ZNF586Q9NXT0 402 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 CLEC5AQ9NY25 188 aa7.33□□□□□ -1.24
NUDCD3-203ENST00000460110 XKRY2A2RUG3 117 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 K7EQM0 130 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 TMEM249Q2WGJ8 235 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 S100A7AQ86SG5 101 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 EEF1AKMT3Q96AZ1 226 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 MXRA5Q9NR99 2828 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 FRMD6-AS1P0C7T7 363 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 DEFB113Q30KQ7 82 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 TOMM20LQ6UXN7 152 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 Q71RC1 249 aaPredicted RBP7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 C5orf56Q8N8D9 126 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 WFDC11Q8NEX6 87 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 HIST1H2BLQ99880 126 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 ZNF331Q9NQX6 463 aaPredicted RBP7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 INS-IGF2F8WCM5 200 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 CTSGP08311 255 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 PVRIGQ6DKI7 326 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 C5orf17Q8NAS9 161 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 Q8TAT8 98 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 SNHG12Q9BXW3 62 aa7.32□□□□□ -1.24
NUDCD3-203ENST00000460110 UBR5O95071 2799 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 IGKV2-40A0A087WW87 121 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 A0A1B0GUS0 222 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 DLEU1O43261 78 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 IGKV2D-40P01614 121 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 CT45A10P0DMU9 189 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 PAX1P15863 534 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 ADMP35318 185 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 ARL3P36405 182 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 DSCR9P59020 149 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 BAGE3Q86Y29 109 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 TTC9CQ8N5M4 171 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 OR2D3Q8NGH3 330 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 NPIPB5A8MRT5 1133 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 TRBV12-3P01733 135 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 P01737 135 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 RPLP1P05386 114 aaKnown RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 RPL19P84098 196 aaKnown RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 ANKRD39Q53RE8 183 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 C10orf99Q6UWK7 81 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 TCF24Q7RTU0 167 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 CUBNO60494 3623 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 HAX1O00165 279 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 TOMM40O96008 361 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 PFN1P07737 140 aaKnown RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 EGR2P11161 476 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 RNF182Q8N6D2 247 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 FAM110DQ8TAY7 271 aaPredicted RBP7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 METTL26Q96S19 204 aa7.31□□□□□ -1.24
NUDCD3-203ENST00000460110 TENM4Q6N022 2769 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 CBY3A6NI87 242 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 RPL7P18124 248 aaKnown RBP7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 Q8N6K4 173 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 WFDC12Q8WWY7 111 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 PGLYRP4Q96LB8 373 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 SHANK2-AS3Q9BTD1 123 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 SRD5A3Q9H8P0 318 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 TEP1Q99973 2627 aaKnown RBP7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 PSMB11A5LHX3 300 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 TCRAP04437 139 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 PMS2P11Q13670 270 aa7.3□□□□□ -1.24
NUDCD3-203ENST00000460110 JOSD1Q15040 202 aaPredicted RBP7.29□□□□□ -1.24
NUDCD3-203ENST00000460110 HOXA3O43365 443 aaPredicted RBP7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms