RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 TMEM256-PLSCR3K7ERE1 68 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 RAB5CP51148 216 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 DYNLT3P51808 116 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 VBP1P61758 197 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 PATE2Q6UY27 113 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 Q6ZQY7 126 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 ARPINQ7Z6K5 226 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 OR8J2Q8NGG1 315 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 BTF3L4Q96K17 158 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 ARL5BQ96KC2 179 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 SIGMAR1Q99720 223 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 OPTCQ9UBM4 332 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 ARL5AQ9Y689 179 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 TNXBP22105 4242 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 MEGF8Q7Z7M0 2845 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 KMT2AQ03164 3969 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 COL12A1Q99715 3063 aa-0.12□□□□□ -2.43
SCARNA18-201ENST00000459004 ZFYVE9O95405 1425 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 BCORL1Q5H9F3 1711 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 TET1Q8NFU7 2136 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 LOC285556D6RIA3 1793 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 FAM159BA6NKW6 160 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 CST8O60676 142 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 TMEM14EPQ6UXP3 125 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 HYLS1Q96M11 299 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 NMNAT1Q9HAN9 279 aaPredicted RBP-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 NBEAL2Q6ZNJ1 2754 aa-0.13□□□□□ -2.43
SCARNA18-201ENST00000459004 FAT2Q9NYQ8 4349 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 SONP18583 2426 aaKnown RBP-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 CACNA1EQ15878 2313 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 SPTBN4Q9H254 2564 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 FXYD4P59646 89 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 LIN52Q52LA3 116 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 Q86TA4 180 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 PLAC4Q8WY50 150 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 TRPM1Q7Z4N2 1603 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 ZANQ9Y493 2812 aa-0.14□□□□□ -2.43
SCARNA18-201ENST00000459004 NCAPD3P42695 1498 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 CEP164Q9UPV0 1460 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 LPAP08519 4548 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 MYO5AQ9Y4I1 1855 aaKnown RBP-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 HMGB3O15347 200 aaKnown RBP-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 CCL7P80098 99 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 EIF3IQ13347 325 aaKnown RBP-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 SPA17Q15506 151 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 RGS21Q2M5E4 152 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 KRTAP6-1Q3LI64 71 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 OCIAD2Q56VL3 154 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 GOLT1AQ6ZVE7 132 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 S100A7AQ86SG5 101 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 CHCHD1Q96BP2 118 aaKnown RBP-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 PPP1R14BQ96C90 147 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 SLC22A13Q9Y226 551 aa-0.15□□□□□ -2.43
SCARNA18-201ENST00000459004 LRP1Q07954 4544 aaKnown RBP-0.16□□□□□ -2.43
SCARNA18-201ENST00000459004 ASH1LQ9NR48 2969 aaKnown RBP-0.16□□□□□ -2.43
SCARNA18-201ENST00000459004 PTPRDP23468 1912 aa-0.16□□□□□ -2.43
SCARNA18-201ENST00000459004 TMEM114B3SHH9 223 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 ITGB3BPQ13352 177 aaPredicted RBP-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 LINC00299Q6ZSB3 139 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 PRR15Q8IV56 129 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 LRRC18Q8N456 261 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 PXT1Q8NFP0 134 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 OR10X1Q8NGY0 326 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 CCL19Q99731 98 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 BOKQ9UMX3 212 aaPredicted RBP-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 NUP210LQ5VU65 1888 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 STAB2Q8WWQ8 2551 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 CHD8Q9HCK8 2581 aa-0.16□□□□□ -2.44
SCARNA18-201ENST00000459004 TEP1Q99973 2627 aaKnown RBP-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 SRRM2Q9UQ35 2752 aaKnown RBP-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 UNC13CQ8NB66 2214 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 hDV103S1A0JD37 113 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 C9orf170A2RU37 121 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 CDKN2CP42773 168 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 OTOGQ6ZRI0 2925 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 OR4K15Q8NH41 348 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 PRAP1Q96NZ9 151 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 PARVGQ9HBI0 331 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 POPDC3Q9HBV1 291 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 ENY2Q9NPA8 101 aa-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 FAM32AQ9Y421 112 aaKnown RBP-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 UBR5O95071 2799 aaPredicted RBP-0.17□□□□□ -2.44
SCARNA18-201ENST00000459004 NISCHQ9Y2I1 1504 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 MIA2Q96PC5 1412 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 UNC79Q9P2D8 2635 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 A0A096LPI6 279 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 GPR31O00270 319 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 IGHV3-33P01772 117 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 CRHP06850 196 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 CYBAP13498 195 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 NFYBP25208 207 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 RPL37AP61513 92 aaKnown RBP-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 KLRD1Q13241 179 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 TAF1AQ15573 450 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 KRTAP20-1Q3LI63 56 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 RMND5BQ96G75 393 aaPredicted RBP-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 ZNF714Q96N38 554 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 VWFP04275 2813 aa-0.18□□□□□ -2.44
SCARNA18-201ENST00000459004 LAMA2P24043 3122 aaKnown RBP-0.18□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms