RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 FNDC4Q9H6D8 234 aaPredicted RBP13.12□□□□□ -0.31
LSS-205ENST00000457828 TCRAP04437 139 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 DLX1P56177 255 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 ZNF843Q8N446 348 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 ARPC1AQ92747 370 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 ZNF414Q96IQ9 312 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 PF4P02776 101 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 P0C879 139 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 SPRNQ5BIV9 151 aa13.12□□□□□ -0.31
LSS-205ENST00000457828 IGHV3OR16-13A0A075B7E8 117 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 IGHV3-74A0A0B4J1X5 117 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 A0A1W2PRX2 142 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 H3BUT2 72 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 IGHV3-11P01762 117 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 IGHV3-23P01764 117 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 RASL11AQ6T310 242 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 TNFRSF14Q92956 283 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 SMIM27A0A1W2PRY6 76 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 MORN5Q5VZ52 161 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 SLC25A2Q9BXI2 301 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 PRSS22Q9GZN4 317 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 MRPS16Q9Y3D3 137 aaKnown RBP13.11□□□□□ -0.31
LSS-205ENST00000457828 PLP1P60201 277 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 RELQ04864 619 aaPredicted RBP13.11□□□□□ -0.31
LSS-205ENST00000457828 FAM106AQ4KMX7 169 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 C7orf71A4D174 169 aa13.11□□□□□ -0.31
LSS-205ENST00000457828 SSBP2P81877 361 aaPredicted RBP13.11□□□□□ -0.31
LSS-205ENST00000457828 NPFFO15130 113 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 CHCHD1Q96BP2 118 aaKnown RBP13.1□□□□□ -0.31
LSS-205ENST00000457828 PSG1P11464 419 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 OR4X2Q8NGF9 303 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 ATG2AQ2TAZ0 1938 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 FNDC10F2Z333 226 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 M0R1W7 72 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 FABP2P12104 132 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 PRTN3P24158 256 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 PET117Q6UWS5 81 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 TMEM167AQ8TBQ9 72 aa13.1□□□□□ -0.31
LSS-205ENST00000457828 CACNG7P62955 275 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 OTORQ9NRC9 128 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 SRD5A1P18405 259 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 WT1-ASQ06250 92 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 TRANK1O15050 2925 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 IGKV1OR2-108A0A075B7D4 117 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 OR2T8A6NH00 312 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 SAA4P35542 130 aa13.09□□□□□ -0.31
LSS-205ENST00000457828 A0A1W2PPI3 338 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 HTN1P15515 57 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 UTF1Q5T230 341 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 EBLN2Q6P2I7 272 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 METTL26Q96S19 204 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 IGHV3-49A0A0A0MS15 119 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 HIST1H1AQ02539 215 aaPredicted RBP13.08□□□□□ -0.32
LSS-205ENST00000457828 CR1LQ2VPA4 569 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 FBXL19-AS1Q494R0 122 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 SAPCD1Q5SSQ6 148 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 TP53TG3Q9ULZ0 132 aa13.08□□□□□ -0.32
LSS-205ENST00000457828 DIAPH2-AS1Q14236 149 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 C8orf46Q8TAG6 207 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 EEF1AKMT3Q96AZ1 226 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 NDUFA4L2Q9NRX3 87 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 IGHV1-3A0A0C4DH29 117 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 ORMDL3Q8N138 153 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 HCFC1P51610 2035 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 RUSC1-AS1Q66K80 236 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 MAP1LC3AQ9H492 121 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 DOPEY1Q5JWR5 2465 aa13.07□□□□□ -0.32
LSS-205ENST00000457828 PRRC2AP48634 2157 aaKnown RBP13.07□□□□□ -0.32
LSS-205ENST00000457828 M0R3E3 92 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 MINOS1Q5TGZ0 78 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 MINOS1-NBL1R4GNA1 71 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 CCL25O15444 150 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 KLK15Q9H2R5 256 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 TPSG1Q9NRR2 321 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 C19orf84I3L1E1 186 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 LOXP28300 417 aaPredicted RBP13.06□□□□□ -0.32
LSS-205ENST00000457828 RIPPLY3P57055 190 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 SPANXN1Q5VSR9 72 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 A0A0G2JLM5 398 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 CFHR2P36980 270 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 OR5AN1Q8NGI8 311 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
LSS-205ENST00000457828 SLC25A39Q9BZJ4 359 aaPredicted RBP13.06□□□□□ -0.32
LSS-205ENST00000457828 DSCAMO60469 2012 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 ITGB1BP1O14713 200 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 ZNF207O43670 478 aaKnown RBP13.05□□□□□ -0.32
LSS-205ENST00000457828 ARMS2P0C7Q2 107 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 KLF17Q5JT82 389 aaPredicted RBP13.05□□□□□ -0.32
LSS-205ENST00000457828 BUB1B-PAK6H3BSN5 160 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 TRAV8-6A0A0B4J262 113 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 DEFB113Q30KQ7 82 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 C21orf62Q9NYP8 219 aa13.05□□□□□ -0.32
LSS-205ENST00000457828 IGHV1-24A0A0C4DH33 117 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 D6R8Y8 96 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 NCR2O95944 276 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 TRIOO75962 3097 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 TRAV30A0A087WSZ9 112 aa13.04□□□□□ -0.32
LSS-205ENST00000457828 RPL7P18124 248 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms