RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 MIR17HGQ75NE6 70 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 TCTE3Q8IZS6 198 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 HSD17B11Q8NBQ5 300 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 SAT2Q96F10 170 aaPredicted RBP7.4□□□□□ -1.22
ATG4A-206ENST00000457035 C16orf92Q96LL3 132 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 C20orf173Q96LM9 149 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 LINC00052Q96N35 136 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 HRH4Q9H3N8 390 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 CYTL1Q9NRR1 136 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 TMEM14CQ9P0S9 112 aa7.4□□□□□ -1.22
ATG4A-206ENST00000457035 hCG_2014768A0A024R1R8 64 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 KIR2DL5BA0A0G2JN68 375 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 KIR2DL5BA0A0G2JPC4 375 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 TAAR5O14804 337 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 RPL35AP18077 110 aaKnown RBP7.39□□□□□ -1.23
ATG4A-206ENST00000457035 CXCL2P19875 107 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 DEFB1P60022 68 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF345Q14585 488 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 IGFL4Q6B9Z1 124 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 KIR2DL5AQ8N109 375 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 KCNRGQ8N5I3 272 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 OR2G3Q8NGZ4 309 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 KIR2DL5BQ8NHK3 375 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 WWC2-AS2Q96NR7 200 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 PSMG3Q9BT73 122 aaPredicted RBP7.39□□□□□ -1.23
ATG4A-206ENST00000457035 SLC25A2Q9BXI2 301 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF586Q9NXT0 402 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 FUT9Q9Y231 359 aa7.39□□□□□ -1.23
ATG4A-206ENST00000457035 BORCS7-ASMTA0A0B4J1R7 106 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 A0A0D9SG52 128 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 H3BMM0 161 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 JTBO76095 146 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 HIST1H1EP10412 219 aaKnown RBP7.38□□□□□ -1.23
ATG4A-206ENST00000457035 M6PRP20645 277 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 SERF2P84101 59 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 ACOT6Q3I5F7 207 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-206ENST00000457035 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 GDF5OSQ5U4N7 250 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 TRPT1Q86TN4 253 aaKnown RBP7.38□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF503Q96F45 646 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 MRPL32Q9BYC8 188 aaKnown RBP7.38□□□□□ -1.23
ATG4A-206ENST00000457035 CSTL1Q9H114 145 aa7.38□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF331Q9NQX6 463 aaPredicted RBP7.38□□□□□ -1.23
ATG4A-206ENST00000457035 H3BTX0 84 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 SLC17A3O00476 420 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 UBE2CO00762 179 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 NDUFB4O95168 129 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 GIG44P09565 113 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-206ENST00000457035 PYYP10082 97 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 HLA-DRB4P13762 266 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 HLA-DMBP28068 263 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 APOC4P55056 127 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 RAB2AP61019 212 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 RHOBP62745 196 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 CD300CQ08708 224 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 PSG3Q16557 428 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 LCN15Q6UWW0 184 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 FOXI2Q6ZQN5 318 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 STHQ8IWL8 128 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 RPP25LQ8N5L8 163 aaKnown RBP7.37□□□□□ -1.23
ATG4A-206ENST00000457035 RNF182Q8N6D2 247 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 GNPNAT1Q96EK6 184 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-206ENST00000457035 SPATA25Q9BR10 227 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 SH3BGRL3Q9H299 93 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 OR51M1Q9H341 326 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 SAV1Q9H4B6 383 aaPredicted RBP7.37□□□□□ -1.23
ATG4A-206ENST00000457035 ZMAT4Q9H898 229 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 RPRMQ9NS64 109 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 HLA-DRB4X5D2U9 266 aa7.37□□□□□ -1.23
ATG4A-206ENST00000457035 KMT2CQ8NEZ4 4911 aaKnown RBP7.36□□□□□ -1.23
ATG4A-206ENST00000457035 TRBV19A0A075B6N1 114 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 A0A0J9YX75 114 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 F6UB75 175 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 EIF4EBP3O60516 100 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF253O75346 499 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 EIF3GO75821 320 aaKnown RBP eCLIP7.36□□□□□ -1.23
ATG4A-206ENST00000457035 C1QBP02746 253 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 NBEAP1P0C6P0 100 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 GUK1Q16774 197 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 LGALSLQ3ZCW2 172 aaPredicted RBP7.36□□□□□ -1.23
ATG4A-206ENST00000457035 Q6ZWC4 215 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 TMUB2Q71RG4 321 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 AKAP14Q86UN6 197 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 OR10G4Q8NGN3 311 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 OR10G9Q8NGN4 311 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 OR10G7Q8NGN6 311 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 LRRC20Q8TCA0 184 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 RNF141Q8WVD5 230 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 FXYD5Q96DB9 178 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 CLUHP3Q96NS8 147 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 RCHY1Q96PM5 261 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 ARPC5LQ9BPX5 153 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 OVOL2Q9BRP0 275 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 SLC50A1Q9BRV3 221 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 PAXXQ9BUH6 204 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 U3KQK5 164 aa7.36□□□□□ -1.23
ATG4A-206ENST00000457035 A0A1W2PPV4 95 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 A8MTW9 85 aa7.35□□□□□ -1.23
ATG4A-206ENST00000457035 ZNF705FA8MVS1 300 aaPredicted RBP7.35□□□□□ -1.23
ATG4A-206ENST00000457035 MBP02144 154 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms