RNA–Protein interactions for RNA: ENST00000456374.2

STAG3L1-202, Transcript of stromal antigen 3-like 1 (pseudogene), humanhuman

BASIC

Gene STAG3L1, Length 894 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAG3L1-202ENST00000456374 SPP1P10451 314 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 UBE2L3P68036 154 aaKnown RBP8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 GUK1Q16774 197 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 APRG1Q8IVJ8 170 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 BAP18Q8IXM2 172 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 STOML3Q8TAV4 291 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 PAXXQ9BUH6 204 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 ACTR3CQ9C0K3 210 aaPredicted RBP8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 OR51M1Q9H341 326 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 HRH4Q9H3N8 390 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 C19orf73Q9NVV2 129 aa8.42□□□□□ -1.06
STAG3L1-202ENST00000456374 H3BTX0 84 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 HMGB3O15347 200 aaKnown RBP8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 OR10J4P0C629 311 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 FRMD6-AS1P0C7T7 363 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 SEC11BP0C7V7 166 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 HIST1H1EP10412 219 aaKnown RBP8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 NKX2-5P52952 324 aaPredicted RBP8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 ZNF124Q15973 351 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 EIF5AL1Q6IS14 154 aaKnown RBP8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 PQLC2Q6ZP29 291 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 SLC51BQ86UW2 128 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 BLNKQ8WV28 456 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 FAM167A-AS1Q96KT0 104 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
STAG3L1-202ENST00000456374 CTXND1A0A1B0GTU2 59 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 A8MZ25 164 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 H3BQ15 152 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 EIF3GO75821 320 aaKnown RBP eCLIP8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 STHQ8IWL8 128 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 IQCF2Q8IXL9 164 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 RNF182Q8N6D2 247 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 ZNF738Q8NE65 137 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 TMED6Q8WW62 240 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 RAB24Q969Q5 203 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 AAMDCQ9H7C9 122 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 ZNF586Q9NXT0 402 aa8.4□□□□□ -1.06
STAG3L1-202ENST00000456374 LOC102724200A0A096LPH7 203 aaPredicted RBP8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 UMAD1C9J7I0 102 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 SLC17A3O00476 420 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 ZNF253O75346 499 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 STAG3L2P0CL84 134 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 STAG3L3P0CL85 134 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 ARL14EPLP0DKL9 152 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 PSG9Q00887 426 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 PDE6HQ13956 83 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 ACTL10Q5JWF8 245 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 IGFL4Q6B9Z1 124 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 EBLN2Q6P2I7 272 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 RPP25LQ8N5L8 163 aaKnown RBP8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 RNF141Q8WVD5 230 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 FXYD5Q96DB9 178 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 C17orf77Q96MU5 243 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 ZNF331Q9NQX6 463 aaPredicted RBP8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 DNAH9Q9NYC9 4486 aa8.39□□□□□ -1.07
STAG3L1-202ENST00000456374 TRBV19A0A075B6N1 114 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 TRAV8-2A0A0B4J237 113 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 KNCNA6PVL3 124 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 CXorf1O96002 111 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 NBEAP1P0C6P0 100 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 RPL35AP18077 110 aaKnown RBP8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 APOC4P55056 127 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 C20orf173Q96LM9 149 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 CITED4Q96RK1 184 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
STAG3L1-202ENST00000456374 MAP1LC3B2A6NCE7 125 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 RBMY1BA6NDE4 496 aaKnown RBP8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 RBMY1EA6NEQ0 496 aaKnown RBP8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 RBMY1DP0C7P1 496 aaKnown RBP8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 HLA-DMBP28068 263 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 GCHFRP30047 84 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 PSG3Q16557 428 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 DPPA3Q6W0C5 159 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 SSX7Q7RTT5 188 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 FAM213BQ8TBF2 198 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 ZNF503Q96F45 646 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 PHYHIPLQ96FC7 376 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 MAP1LC3BQ9GZQ8 125 aa8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 SAV1Q9H4B6 383 aaPredicted RBP8.37□□□□□ -1.07
STAG3L1-202ENST00000456374 F6UB75 175 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 BOLA2-SMG1P6H3BVE0 249 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 FHITP49789 147 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 FGF8P55075 233 aaPredicted RBP8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 DEFB1P60022 68 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 ZNF726P1Q15940 193 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 FAM74A1Q5RGS3 127 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 TRPT1Q86TN4 253 aaKnown RBP8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 EXOC3-AS1Q8N2X6 119 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 RPUSD4Q96CM3 377 aaKnown RBP8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 SAT2Q96F10 170 aaPredicted RBP8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 TMEM167BQ9NRX6 74 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 PRELID1Q9Y255 219 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
STAG3L1-202ENST00000456374 NDUFB4O95168 129 aa8.35□□□□□ -1.07
STAG3L1-202ENST00000456374 IGKV3-20P01619 116 aa8.35□□□□□ -1.07
STAG3L1-202ENST00000456374 RAB5CP51148 216 aa8.35□□□□□ -1.07
STAG3L1-202ENST00000456374 RANP62826 216 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms