RNA–Protein interactions for RNA: ENST00000456096.6

TVP23A-202, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,223 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-202ENST00000456096 PLP1P60201 277 aa11.66□□□□□ -0.54
TVP23A-202ENST00000456096 POLR2GP62487 172 aaKnown RBP eCLIP11.66□□□□□ -0.54
TVP23A-202ENST00000456096 ID3Q02535 119 aa11.66□□□□□ -0.54
TVP23A-202ENST00000456096 RPUSD4Q96CM3 377 aaKnown RBP11.66□□□□□ -0.54
TVP23A-202ENST00000456096 PMS2P5A8MQ11 134 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 ADAP1O75689 374 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 SELENOTP62341 195 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 PATE2Q6UY27 113 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 ZNF493Q6ZR52 646 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 ARL6Q9H0F7 186 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 Q9H8V8 135 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 PSENENQ9NZ42 101 aa11.65□□□□□ -0.54
TVP23A-202ENST00000456096 H3BMQ9 156 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 MRPS12O15235 138 aaKnown RBP11.64□□□□□ -0.55
TVP23A-202ENST00000456096 CCNKO75909 580 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 CDKN1BP46527 198 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 RRAS2P62070 204 aaPredicted RBP11.64□□□□□ -0.55
TVP23A-202ENST00000456096 OR5I1Q13606 314 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 KIR3DS1Q14943 382 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
TVP23A-202ENST00000456096 RNASE8Q8TDE3 154 aaKnown RBP11.64□□□□□ -0.55
TVP23A-202ENST00000456096 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 H7BYZ3 331 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 SSSCA1O60232 199 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 SNRPCP09234 159 aaKnown RBP11.63□□□□□ -0.55
TVP23A-202ENST00000456096 ANXA7P20073 488 aaKnown RBP11.63□□□□□ -0.55
TVP23A-202ENST00000456096 TMEM263Q8WUH6 116 aaKnown RBP11.63□□□□□ -0.55
TVP23A-202ENST00000456096 SMIM8Q96KF7 97 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 KRTAP1-5Q9BYS1 174 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 V9GYH0 126 aa11.63□□□□□ -0.55
TVP23A-202ENST00000456096 NOL3O60936 208 aaKnown RBP11.62□□□□□ -0.55
TVP23A-202ENST00000456096 S100A7AQ86SG5 101 aa11.62□□□□□ -0.55
TVP23A-202ENST00000456096 Q8N1X5 172 aa11.62□□□□□ -0.55
TVP23A-202ENST00000456096 OR10J6PQ8NGY7 276 aa11.62□□□□□ -0.55
TVP23A-202ENST00000456096 GNPNAT1Q96EK6 184 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-202ENST00000456096 PARD6GQ9BYG4 376 aaPredicted RBP11.62□□□□□ -0.55
TVP23A-202ENST00000456096 ARV1Q9H2C2 271 aa11.62□□□□□ -0.55
TVP23A-202ENST00000456096 NPVFQ9HCQ7 196 aa11.62□□□□□ -0.55
TVP23A-202ENST00000456096 C9orf170A2RU37 121 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 METTL15P1P0C7V9 234 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 HOXA5P20719 270 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 UBE2MP61081 183 aaKnown RBP11.61□□□□□ -0.55
TVP23A-202ENST00000456096 DLK1P80370 383 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 SLC38A11Q08AI6 406 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 TMEM14EPQ6UXP3 125 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 LINC00612Q8N6U2 182 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 RXFP4Q8TDU9 374 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 DEDD2Q8WXF8 326 aa11.61□□□□□ -0.55
TVP23A-202ENST00000456096 ZNF331Q9NQX6 463 aaPredicted RBP11.61□□□□□ -0.55
TVP23A-202ENST00000456096 A0A0J9YY99 117 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 PRAC2D3DTV9 90 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 K7EPK0 472 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 ZNF701M0R085 212 aaPredicted RBP11.6□□□□□ -0.55
TVP23A-202ENST00000456096 M6PRP20645 277 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 ESRGQ1W209 222 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 GFI1BQ5VTD9 330 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 TEPPQ6URK8 271 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 LCN15Q6UWW0 184 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 LINC00305Q7Z4B0 112 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 ZNF503Q96F45 646 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 C20orf144Q9BQM9 153 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 Q9H3A6 140 aa11.6□□□□□ -0.55
TVP23A-202ENST00000456096 GAGE12BA1L429 117 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 FNDC10F2Z333 226 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 H3BTX0 84 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 GAGE7O76087 117 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 GAGE12FP0CL80 117 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 GAGE12GP0CL81 117 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 GAGE12IP0CL82 117 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 CXCL2P19875 107 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 KRTAP10-2P60368 255 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 TTC32Q5I0X7 151 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 CCDC28AQ8IWP9 274 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 SLC50A1Q9BRV3 221 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 SCRT2Q9NQ03 307 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 MGAT4CQ9UBM8 478 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 RNF24Q9Y225 148 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 HERC1Q15751 4861 aa11.59□□□□□ -0.55
TVP23A-202ENST00000456096 GOSR2O14653 212 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 PXDC1Q5TGL8 231 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 CCDC190Q86UF4 302 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 OR10P1Q8NGE3 313 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 UPK3BQ9BT76 320 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 FLVCR2Q9UPI3 526 aa11.58□□□□□ -0.56
TVP23A-202ENST00000456096 SLC17A3O00476 420 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 AGPAT2O15120 278 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 SCGB1D2O95969 90 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 RLN2P04090 185 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 ARL16Q0P5N6 197 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 ZNF546Q86UE3 836 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 BPIFA4PQ86YQ2 179 aa11.57□□□□□ -0.56
TVP23A-202ENST00000456096 ZBTB8BQ8NAP8 495 aaPredicted RBP11.57□□□□□ -0.56
TVP23A-202ENST00000456096 SNURFLB1AK76 121 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 J3KRW8 73 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 OR4E1P0C645 316 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 S100A5P33763 92 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 MORN5Q5VZ52 161 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 TMEM37Q8WXS4 190 aa11.56□□□□□ -0.56
TVP23A-202ENST00000456096 MRPS16Q9Y3D3 137 aaKnown RBP11.56□□□□□ -0.56
TVP23A-202ENST00000456096 TRAV12-3A0A0B4J271 114 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms