RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 NBEAP1P0C6P0 100 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 RPL11P62913 178 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 PDE6HQ13956 83 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 MS4A6AQ9H2W1 248 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 TMPRSS5Q9H3S3 457 aa12.47□□□□□ -0.41
CCDC90B-202ENST00000455220 TRAV2A0A0B4J234 112 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 IZUMO1RA6ND01 250 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 TEX46H3BTG2 121 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 SOCS3O14543 225 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 ZNF253O75346 499 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 PSMB3P49720 205 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 DCANP1Q8TF63 244 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 SPAG8Q99932 426 aaPredicted RBP12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 GPR61Q9BZJ8 451 aa12.46□□□□□ -0.42
CCDC90B-202ENST00000455220 NDUFB4O95168 129 aa12.45□□□□□ -0.42
CCDC90B-202ENST00000455220 SNRPCP09234 159 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-202ENST00000455220 CCL20P78556 96 aa12.45□□□□□ -0.42
CCDC90B-202ENST00000455220 LCN12Q6JVE5 192 aa12.45□□□□□ -0.42
CCDC90B-202ENST00000455220 PCNPQ8WW12 178 aaKnown RBP12.45□□□□□ -0.42
CCDC90B-202ENST00000455220 IGKV3-7A0A075B6H7 116 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 A0A1B0GV50 99 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 H3BTX0 84 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 SLC17A3O00476 420 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 PAFAH1B2P68402 229 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 PMS2P11Q13670 270 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 SAMD13Q5VXD3 122 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 IQCF2Q8IXL9 164 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 BLNKQ8WV28 456 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 SORL1Q92673 2214 aa12.44□□□□□ -0.42
CCDC90B-202ENST00000455220 K7EQG2 157 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 RAB14P61106 215 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 CLLU1Q5K131 121 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 GBGT1Q8N5D6 347 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 SLC50A1Q9BRV3 221 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 ZNF331Q9NQX6 463 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 ZNF256Q9Y2P7 627 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 DNAH3Q8TD57 4116 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 DNASE2O00115 360 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 PPT1P50897 306 aa12.43□□□□□ -0.42
CCDC90B-202ENST00000455220 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
CCDC90B-202ENST00000455220 A0A1W2PRE2 83 aa12.42□□□□□ -0.42
CCDC90B-202ENST00000455220 OR4C46A6NHA9 309 aa12.42□□□□□ -0.42
CCDC90B-202ENST00000455220 ISLRO14498 428 aa12.42□□□□□ -0.42
CCDC90B-202ENST00000455220 LYPD1Q8N2G4 141 aa12.42□□□□□ -0.42
CCDC90B-202ENST00000455220 MGAM2Q2M2H8 2515 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 TFPI2P48307 235 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 PSG9Q00887 426 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 GUCA2BQ16661 112 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 BEAN1Q3B7T3 259 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 OXLD1Q5BKU9 147 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 WFDC3Q8IUB2 231 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 C16orf92Q96LL3 132 aa12.41□□□□□ -0.42
CCDC90B-202ENST00000455220 FAM74A7A6NL05 159 aa12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 RANP62826 216 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 FAM24BQ8N5W8 94 aa12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 Q9H3A6 140 aa12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 MANBALQ9NQG1 85 aa12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 CLEC5AQ9NY25 188 aa12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 YTHDF2Q9Y5A9 579 aaKnown RBP12.4□□□□□ -0.42
CCDC90B-202ENST00000455220 ID1P41134 155 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 UBE2G2P60604 165 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 SAMD5Q5TGI4 173 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 OTORQ9NRC9 128 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 GNG13Q9P2W3 67 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 GGTLC3B5MD39 225 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 PAGE4O60829 102 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 EGFEM1PQ0D2K5 195 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 IGFL4Q6B9Z1 124 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 EXOC3-AS1Q8N2X6 119 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 NKX6-2Q9C056 277 aaPredicted RBP12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 AAMDCQ9H7C9 122 aa12.39□□□□□ -0.43
CCDC90B-202ENST00000455220 IFNA1P01562 189 aa12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 BCL2P10415 239 aa12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 HLA-DMBP28068 263 aa12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 SNRPD3P62318 126 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 RNF182Q8N6D2 247 aa12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 MRPL53Q96EL3 112 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 C20orf173Q96LM9 149 aa12.38□□□□□ -0.43
CCDC90B-202ENST00000455220 ZNF688P0C7X2 276 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 TAGLN2P37802 199 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 ICAM4Q14773 271 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 PSG3Q16557 428 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 CCDC28AQ8IWP9 274 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 FAM210AQ96ND0 272 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 FAM110AQ9BQ89 295 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 PRELID1Q9Y255 219 aa12.37□□□□□ -0.43
CCDC90B-202ENST00000455220 PGPA6NDG6 321 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 G3V4G9 280 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 ODF3L2Q3SX64 289 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 ARL6IP6Q8N6S5 226 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 TXNDC17Q9BRA2 123 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 MAP6D1Q9H9H5 199 aa12.36□□□□□ -0.43
CCDC90B-202ENST00000455220 LOC102723971A0A1B0GUV8 181 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 M0R3E3 92 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 ATP5G3P48201 142 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 SUMO1P63165 101 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 HAGHQ16775 308 aa12.35□□□□□ -0.43
CCDC90B-202ENST00000455220 PSMG4Q5JS54 123 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms