RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 ARL2-SNX15V9GYD0 113 aa8.46□□□□□ -1.06
TRAF4-206ENST00000454852 TRBV19A0A075B6N1 114 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 NBEAP1P0C6P0 100 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 PYYP10082 97 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 ATF4P18848 351 aaPredicted RBP8.45□□□□□ -1.06
TRAF4-206ENST00000454852 PPT1P50897 306 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 RAB14P61106 215 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 UBE2L3P68036 154 aaKnown RBP8.45□□□□□ -1.06
TRAF4-206ENST00000454852 CLLU1Q5K131 121 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 LCN12Q6JVE5 192 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 RBPMS2Q6ZRY4 209 aaKnown RBP8.45□□□□□ -1.06
TRAF4-206ENST00000454852 LYPD1Q8N2G4 141 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 SLC50A1Q9BRV3 221 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 MS4A6AQ9H2W1 248 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 ZNF586Q9NXT0 402 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 CLEC5AQ9NY25 188 aa8.45□□□□□ -1.06
TRAF4-206ENST00000454852 A0A1W2PRE2 83 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 ZNF785A8K8V0 405 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 K7EQG2 157 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 HMGB3O15347 200 aaKnown RBP8.44□□□□□ -1.06
TRAF4-206ENST00000454852 EIF3GO75821 320 aaKnown RBP eCLIP8.44□□□□□ -1.06
TRAF4-206ENST00000454852 NDUFB4O95168 129 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 IGLL1P15814 213 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 PAFAH1B2P68402 229 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 EGFEM1PQ0D2K5 195 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 ARL6IP6Q8N6S5 226 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 FAM110AQ9BQ89 295 aa8.44□□□□□ -1.06
TRAF4-206ENST00000454852 ZNF331Q9NQX6 463 aaPredicted RBP8.44□□□□□ -1.06
TRAF4-206ENST00000454852 ZNF256Q9Y2P7 627 aaPredicted RBP8.44□□□□□ -1.06
TRAF4-206ENST00000454852 LINC00862A6NCI5 91 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 IZUMO1RA6ND01 250 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 OR4C46A6NHA9 309 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 ISLRO14498 428 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 OR10J4P0C629 311 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 S100A1P23297 94 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 PSG9Q00887 426 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 BEAN1Q3B7T3 259 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 SAMD5Q5TGI4 173 aa8.43□□□□□ -1.06
TRAF4-206ENST00000454852 NKX6-2Q9C056 277 aaPredicted RBP8.43□□□□□ -1.06
TRAF4-206ENST00000454852 ZMAT5Q9UDW3 170 aaKnown RBP8.43□□□□□ -1.06
TRAF4-206ENST00000454852 DNAH3Q8TD57 4116 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 TRAV8-2A0A0B4J237 113 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 NDUFS6O75380 124 aaKnown RBP8.42□□□□□ -1.06
TRAF4-206ENST00000454852 TAGLN2P37802 199 aaKnown RBP8.42□□□□□ -1.06
TRAF4-206ENST00000454852 FGF8P55075 233 aaPredicted RBP8.42□□□□□ -1.06
TRAF4-206ENST00000454852 CMC4P56277 68 aaPredicted RBP8.42□□□□□ -1.06
TRAF4-206ENST00000454852 CCL20P78556 96 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 MRPL53Q96EL3 112 aaKnown RBP8.42□□□□□ -1.06
TRAF4-206ENST00000454852 TXNDC17Q9BRA2 123 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 TMPRSS5Q9H3S3 457 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 MANBALQ9NQG1 85 aa8.42□□□□□ -1.06
TRAF4-206ENST00000454852 SLC17A3O00476 420 aa8.41□□□□□ -1.06
TRAF4-206ENST00000454852 ID1P41134 155 aa8.41□□□□□ -1.06
TRAF4-206ENST00000454852 RPL11P62913 178 aaKnown RBP8.41□□□□□ -1.06
TRAF4-206ENST00000454852 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
TRAF4-206ENST00000454852 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
TRAF4-206ENST00000454852 PRELID1Q9Y255 219 aa8.41□□□□□ -1.06
TRAF4-206ENST00000454852 FAM74A7A6NL05 159 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 DNASE2O00115 360 aaPredicted RBP8.4□□□□□ -1.06
TRAF4-206ENST00000454852 KPRPQ5T749 579 aaPredicted RBP8.4□□□□□ -1.06
TRAF4-206ENST00000454852 CCDC28AQ8IWP9 274 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 BLNKQ8WV28 456 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 C16orf92Q96LL3 132 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 Q9H3A6 140 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 MED9Q9NWA0 146 aa8.4□□□□□ -1.06
TRAF4-206ENST00000454852 PKD1L1Q8TDX9 2849 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 NOTCH3Q9UM47 2321 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 H3BTX0 84 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 IFNA1P01562 189 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 SNRPD3P62318 126 aaKnown RBP8.39□□□□□ -1.07
TRAF4-206ENST00000454852 RANP62826 216 aaKnown RBP8.39□□□□□ -1.07
TRAF4-206ENST00000454852 PSG3Q16557 428 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 GUCA2BQ16661 112 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 OXLD1Q5BKU9 147 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 GBGT1Q8N5D6 347 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 RXFP4Q8TDU9 374 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 FAM210AQ96ND0 272 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 AAMDCQ9H7C9 122 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 C19orf73Q9NVV2 129 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 YTHDF2Q9Y5A9 579 aaKnown RBP8.39□□□□□ -1.07
TRAF4-206ENST00000454852 SELENOKQ9Y6D0 94 aa8.39□□□□□ -1.07
TRAF4-206ENST00000454852 IGKV3-7A0A075B6H7 116 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 GGTLC3B5MD39 225 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 PAGE4O60829 102 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 SNRPCP09234 159 aaKnown RBP8.38□□□□□ -1.07
TRAF4-206ENST00000454852 BCL2P10415 239 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 ODF3L2Q3SX64 289 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 IQCF2Q8IXL9 164 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 FAM24BQ8N5W8 94 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 C5orf17Q8NAS9 161 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 PCNPQ8WW12 178 aaKnown RBP8.38□□□□□ -1.07
TRAF4-206ENST00000454852 C20orf173Q96LM9 149 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 SMDT1Q9H4I9 107 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 MAP6D1Q9H9H5 199 aa8.38□□□□□ -1.07
TRAF4-206ENST00000454852 LOC102723971A0A1B0GUV8 181 aa8.37□□□□□ -1.07
TRAF4-206ENST00000454852 A0A1B0GV50 99 aa8.37□□□□□ -1.07
TRAF4-206ENST00000454852 SERTM2A0A1B0GWG4 89 aa8.37□□□□□ -1.07
TRAF4-206ENST00000454852 PGPA6NDG6 321 aa8.37□□□□□ -1.07
TRAF4-206ENST00000454852 TFPI2P48307 235 aa8.37□□□□□ -1.07
TRAF4-206ENST00000454852 SUMO1P63165 101 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 129.4 ms