RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 SMG1Q96Q15 3661 aaKnown RBP9.01□□□□□ -0.97
DDR1-240ENST00000454612 PRSS1P07477 247 aa9.01□□□□□ -0.97
DDR1-240ENST00000454612 IGHV1-8P0DP01 117 aa9.01□□□□□ -0.97
DDR1-240ENST00000454612 MC5RP33032 325 aa9.01□□□□□ -0.97
DDR1-240ENST00000454612 SRSF8Q9BRL6 282 aaKnown RBP9.01□□□□□ -0.97
DDR1-240ENST00000454612 LOC107984156A0A0G2JMH3 177 aa9□□□□□ -0.97
DDR1-240ENST00000454612 ARL17AQ8IVW1 177 aa9□□□□□ -0.97
DDR1-240ENST00000454612 TMEM14BQ9NUH8 114 aa9□□□□□ -0.97
DDR1-240ENST00000454612 FAM231BA6NCW3 169 aa9□□□□□ -0.97
DDR1-240ENST00000454612 K7EP13 123 aa9□□□□□ -0.97
DDR1-240ENST00000454612 TBR1Q16650 682 aa9□□□□□ -0.97
DDR1-240ENST00000454612 C18orf15Q96N68 181 aa9□□□□□ -0.97
DDR1-240ENST00000454612 RCHY1Q96PM5 261 aa9□□□□□ -0.97
DDR1-240ENST00000454612 UCNP55089 124 aa9□□□□□ -0.97
DDR1-240ENST00000454612 RPL15P61313 204 aaKnown RBP9□□□□□ -0.97
DDR1-240ENST00000454612 CITED1Q99966 193 aa9□□□□□ -0.97
DDR1-240ENST00000454612 PYGO2Q9BRQ0 406 aa9□□□□□ -0.97
DDR1-240ENST00000454612 IGLV3-9A0A075B6K5 115 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 IGHV2-26A0A0B4J1V2 119 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 ZNF672Q499Z4 452 aaPredicted RBP8.99□□□□□ -0.97
DDR1-240ENST00000454612 C17orf77Q96MU5 243 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 MRPS16Q9Y3D3 137 aaKnown RBP8.99□□□□□ -0.97
DDR1-240ENST00000454612 KHDC1LQ5JSQ8 128 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 TMEM219Q86XT9 240 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 MTURNQ8N3F0 131 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 Q8TAT8 98 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 A1L4Q6 167 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 IGLL1P15814 213 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 ACANP16112 2415 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 A8MWL6 223 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
DDR1-240ENST00000454612 TSSC4Q9Y5U2 329 aaPredicted RBP8.99□□□□□ -0.97
DDR1-240ENST00000454612 A0A0G2JLM5 398 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 TCRBV4S1A1TA0A5B7 111 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 ANAPC13Q9BS18 74 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 KLK15Q9H2R5 256 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 GEMIN7Q9H840 131 aaKnown RBP8.98□□□□□ -0.97
DDR1-240ENST00000454612 IGHV3-11P01762 117 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 ATP6V0BQ99437 205 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 EPDR1Q9UM22 224 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 ZNF257Q9Y2Q1 563 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 LOXP28300 417 aaPredicted RBP8.98□□□□□ -0.97
DDR1-240ENST00000454612 OR4A5Q8NH83 315 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 ST20Q9HBF5 79 aa8.98□□□□□ -0.97
DDR1-240ENST00000454612 SMIM13P0DJ93 91 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 FOXL1Q12952 345 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 SLAQ13239 276 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 TMEM136Q6ZRR5 245 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 ASH1LQ9NR48 2969 aaKnown RBP8.97□□□□□ -0.97
DDR1-240ENST00000454612 IGHV1-3A0A0C4DH29 117 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 A0A1W2PS18 150 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 IGKV3-20P01619 116 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 LIPFP07098 398 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 CEACAM3P40198 252 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 HSD52Q0P140 79 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 TWIST1Q15672 202 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 NUP35Q8NFH5 326 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 TRBV9A0A0B4J1U6 114 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 B9A039 149 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 K7ENP7 123 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 THBDP07204 575 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 LGALS7P47929 136 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 TTC32Q5I0X7 151 aa8.97□□□□□ -0.97
DDR1-240ENST00000454612 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.97□□□□□ -0.97
DDR1-240ENST00000454612 ZNF48Q96MX3 618 aaPredicted RBP8.97□□□□□ -0.97
DDR1-240ENST00000454612 PKD1L2Q7Z442 2459 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 TRAV26-1A0A087WT03 109 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 NPIPB5A8MRT5 1133 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 SPRY2O43597 315 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 SRD5A1P18405 259 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 STXBP6Q8NFX7 210 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 TXNDC17Q9BRA2 123 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 DPM3Q9P2X0 92 aa8.96□□□□□ -0.97
DDR1-240ENST00000454612 IGKV2-40A0A087WW87 121 aaPredicted RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 IGKV2D-40P01614 121 aaPredicted RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 HIST1H1AQ02539 215 aaPredicted RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 C2orf83Q53S99 150 aa8.96□□□□□ -0.98
DDR1-240ENST00000454612 ZNF418Q8TF45 676 aaPredicted RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 NHP2Q9NX24 153 aaKnown RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
DDR1-240ENST00000454612 FAM169BQ8N8A8 192 aa8.96□□□□□ -0.98
DDR1-240ENST00000454612 GLMPQ8WWB7 406 aa8.96□□□□□ -0.98
DDR1-240ENST00000454612 NDUFB8O95169 186 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 MEF2CQ06413 473 aaPredicted RBP8.95□□□□□ -0.98
DDR1-240ENST00000454612 BRD3OSQ6XYD6 125 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 TP73-AS1Q9UF72 201 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 FAM181BA6NEQ2 426 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 C22orf46C9J442 243 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 CD5LO43866 347 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 NCR2O95944 276 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 TSKUQ8WUA8 353 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 GPR82Q96P67 336 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 NDUFA4L2Q9NRX3 87 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 SS18L2Q9UHA2 77 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 SIGLEC9Q9Y336 463 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 SMKR1H3BMG3 65 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 TGFAP01135 160 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 PPBPP02775 128 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 NDPQ00604 133 aa8.95□□□□□ -0.98
DDR1-240ENST00000454612 CLEC19AQ6UXS0 136 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms