RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 PSENENQ9NZ42 101 aa16.58■□□□□ 0.24
LYSMD2-202ENST00000454181 A0A087X0K7 114 aa16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 ADAP1O75689 374 aa16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 TTC32Q5I0X7 151 aa16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 RPUSD4Q96CM3 377 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 GNPNAT1Q96EK6 184 aaPredicted RBP16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 UHRF2Q96PU4 802 aa16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 SLIRPQ9GZT3 109 aaKnown RBP16.57■□□□□ 0.24
LYSMD2-202ENST00000454181 H7BYZ3 331 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 PLP1P60201 277 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 SPATA12Q7Z6I5 190 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 CCDC28AQ8IWP9 274 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 TMEM263Q8WUH6 116 aaKnown RBP16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 ARL6Q9H0F7 186 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 HSPG2P98160 4391 aa16.56■□□□□ 0.24
LYSMD2-202ENST00000454181 POLR2GP62487 172 aaKnown RBP eCLIP16.55■□□□□ 0.24
LYSMD2-202ENST00000454181 TRIM63Q969Q1 353 aa16.55■□□□□ 0.24
LYSMD2-202ENST00000454181 M6PRP20645 277 aa16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 RRAS2P62070 204 aaPredicted RBP16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 ID3Q02535 119 aa16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 RNASE8Q8TDE3 154 aaKnown RBP16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 DEDD2Q8WXF8 326 aa16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 NPVFQ9HCQ7 196 aa16.54■□□□□ 0.24
LYSMD2-202ENST00000454181 TRAV26-1A0A087WT03 109 aa16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 PMS2P5A8MQ11 134 aa16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 PRB4P10163 310 aaPredicted RBP16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 C20orf144Q9BQM9 153 aa16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 ARV1Q9H2C2 271 aa16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 MGAT4CQ9UBM8 478 aa16.53■□□□□ 0.24
LYSMD2-202ENST00000454181 SSSCA1O60232 199 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 UBE2MP61081 183 aaKnown RBP16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 LCN15Q6UWW0 184 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 Q8N1X5 172 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 RXFP4Q8TDU9 374 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 ZNF503Q96F45 646 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 SCRT2Q9NQ03 307 aa16.52■□□□□ 0.24
LYSMD2-202ENST00000454181 A0A0J9YY99 117 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 GOSR2O14653 212 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 RLN2P04090 185 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 CXCL2P19875 107 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 DLK1P80370 383 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 PXDC1Q5TGL8 231 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 TEPPQ6URK8 271 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 OR10P1Q8NGE3 313 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 SMIM8Q96KF7 97 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 SLC50A1Q9BRV3 221 aa16.51■□□□□ 0.23
LYSMD2-202ENST00000454181 SNURFLB1AK76 121 aa16.5■□□□□ 0.23
LYSMD2-202ENST00000454181 H3BMQ9 156 aa16.5■□□□□ 0.23
LYSMD2-202ENST00000454181 METTL15P1P0C7V9 234 aa16.5■□□□□ 0.23
LYSMD2-202ENST00000454181 CCDC190Q86UF4 302 aa16.5■□□□□ 0.23
LYSMD2-202ENST00000454181 ZNF331Q9NQX6 463 aaPredicted RBP16.5■□□□□ 0.23
LYSMD2-202ENST00000454181 GAGE12BA1L429 117 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 FNDC10F2Z333 226 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 ZNF701M0R085 212 aaPredicted RBP16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 GAGE7O76087 117 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 GAGE12FP0CL80 117 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 GAGE12GP0CL81 117 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 GAGE12IP0CL82 117 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 S100A5P33763 92 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 SLC38A11Q08AI6 406 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 PATE2Q6UY27 113 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 Q9H3A6 140 aa16.49■□□□□ 0.23
LYSMD2-202ENST00000454181 LRP1BQ9NZR2 4599 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 C9orf170A2RU37 121 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 K7EPK0 472 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 SNRPCP09234 159 aaKnown RBP16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 LINC00305Q7Z4B0 112 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 ZNF546Q86UE3 836 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 BPIFA4PQ86YQ2 179 aa16.48■□□□□ 0.23
LYSMD2-202ENST00000454181 A0A1W2PPQ1 181 aa16.47■□□□□ 0.23
LYSMD2-202ENST00000454181 CCNKO75909 580 aa16.47■□□□□ 0.23
LYSMD2-202ENST00000454181 SCGB1D2O95969 90 aa16.47■□□□□ 0.23
LYSMD2-202ENST00000454181 MRPS12O15235 138 aaKnown RBP16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 COX7A2P2O60397 106 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 INPP1P49441 399 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 KIR3DS1Q14943 382 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 ESRGQ1W209 222 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 GFI1BQ5VTD9 330 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 TMEM14EPQ6UXP3 125 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 LINC00612Q8N6U2 182 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 UPK3BQ9BT76 320 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 PARD6GQ9BYG4 376 aaPredicted RBP16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 V9GYH0 126 aa16.46■□□□□ 0.23
LYSMD2-202ENST00000454181 H3BNG1 76 aa16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 J3KRW8 73 aa16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 BTF3P20290 206 aaKnown RBP16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 HOXA5P20719 270 aa16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 KRTAP1-5Q9BYS1 174 aa16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 MRPS16Q9Y3D3 137 aaKnown RBP16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 PXMP4Q9Y6I8 212 aa16.45■□□□□ 0.22
LYSMD2-202ENST00000454181 AGPAT2O15120 278 aa16.44■□□□□ 0.22
LYSMD2-202ENST00000454181 H3BTX0 84 aa16.43■□□□□ 0.22
LYSMD2-202ENST00000454181 TSC22D2O75157 780 aa16.43■□□□□ 0.22
LYSMD2-202ENST00000454181 LEPP41159 167 aa16.43■□□□□ 0.22
LYSMD2-202ENST00000454181 ZNF586Q9NXT0 402 aa16.43■□□□□ 0.22
LYSMD2-202ENST00000454181 GSKIPQ9P0R6 139 aa16.43■□□□□ 0.22
LYSMD2-202ENST00000454181 TRAV12-3A0A0B4J271 114 aa16.42■□□□□ 0.22
LYSMD2-202ENST00000454181 PRAC2D3DTV9 90 aa16.42■□□□□ 0.22
LYSMD2-202ENST00000454181 TAS2R30P59541 319 aa16.42■□□□□ 0.22
LYSMD2-202ENST00000454181 KRTAP10-2P60368 255 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms