RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 LCN15Q6UWW0 184 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 GBGT1Q8N5D6 347 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 HSD17B11Q8NBQ5 300 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 OR11H4Q8NGC9 324 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 SLC50A1Q9BRV3 221 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 RSG1Q9BU20 258 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 TUBA4BQ9H853 241 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 MAP6D1Q9H9H5 199 aa6.49□□□□□ -1.37
COL28A1-205ENST00000453441 IGKV3-7A0A075B6H7 116 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 A0A1W2PPV4 95 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 CD7P09564 240 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 IGHV4-30-4P0DP06 118 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 TFPI2P48307 235 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 PDE6HQ13956 83 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 ZFP69Q49AA0 526 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 KHDC3LQ587J8 217 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 DEFB121Q5J5C9 76 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 RPL7L1Q6DKI1 246 aaKnown RBP6.48□□□□□ -1.37
COL28A1-205ENST00000453441 EIF5AL1Q6IS14 154 aaKnown RBP6.48□□□□□ -1.37
COL28A1-205ENST00000453441 B9D2Q9BPU9 175 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 HRH4Q9H3N8 390 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 SRD5A3Q9H8P0 318 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 X6R8D5 127 aa6.48□□□□□ -1.37
COL28A1-205ENST00000453441 UMAD1C9J7I0 102 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 SOCS3O14543 225 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 MRPS12O15235 138 aaKnown RBP6.47□□□□□ -1.37
COL28A1-205ENST00000453441 PRB2P02812 416 aaPredicted RBP6.47□□□□□ -1.37
COL28A1-205ENST00000453441 SEC11BP0C7V7 166 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 IGLC2P0DOY2 106 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 HIST1H1EP10412 219 aaKnown RBP6.47□□□□□ -1.37
COL28A1-205ENST00000453441 TPT1P13693 172 aaKnown RBP6.47□□□□□ -1.37
COL28A1-205ENST00000453441 APOC4P55056 127 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 LEMD1Q68G75 181 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 PQLC2Q6ZP29 291 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 TMUB2Q71RG4 321 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 OR10G4Q8NGN3 311 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 OR10G9Q8NGN4 311 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 OR10G7Q8NGN6 311 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 STOML3Q8TAV4 291 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 LRRC20Q8TCA0 184 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 C16orf92Q96LL3 132 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 ZNF471Q9BX82 626 aaPredicted RBP6.47□□□□□ -1.37
COL28A1-205ENST00000453441 CYTL1Q9NRR1 136 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 RPRMQ9NS64 109 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 SELENOKQ9Y6D0 94 aa6.47□□□□□ -1.37
COL28A1-205ENST00000453441 PRKDCP78527 4128 aaKnown RBP6.46□□□□□ -1.37
COL28A1-205ENST00000453441 LOC102724200A0A096LPH7 203 aaPredicted RBP6.46□□□□□ -1.38
COL28A1-205ENST00000453441 KIR2DL5BA0A0G2JN68 375 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 KIR2DL5BA0A0G2JPC4 375 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 A0A1B0GVG6 124 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 UBE2CO00762 179 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 FRMD6-AS1P0C7T7 363 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 ZNF688P0C7X2 276 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 NHLRC4P0CG21 123 aaPredicted RBP6.46□□□□□ -1.38
COL28A1-205ENST00000453441 SPP1P10451 314 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 CDC34P49427 236 aaPredicted RBP6.46□□□□□ -1.38
COL28A1-205ENST00000453441 DEFB131AP59861 70 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 PSG9Q00887 426 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 TMEM41BQ5BJD5 291 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 GCSAMLQ5JQS6 135 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 PSMG4Q5JS54 123 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 AKR1C8PQ5T2L2 129 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 FOXI2Q6ZQN5 318 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 BAP18Q8IXM2 172 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 KIR2DL5AQ8N109 375 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 DEFB125Q8N687 156 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 KIR2DL5BQ8NHK3 375 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 CLUHP3Q96NS8 147 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 SLC25A2Q9BXI2 301 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 ACTR3CQ9C0K3 210 aaPredicted RBP6.46□□□□□ -1.38
COL28A1-205ENST00000453441 OR51M1Q9H341 326 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 UBQLN2Q9UHD9 624 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 PLA2G2DQ9UNK4 145 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 PRELID1Q9Y255 219 aa6.46□□□□□ -1.38
COL28A1-205ENST00000453441 OR7C2O60412 319 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 RAB2AP61019 212 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 LGALSLQ3ZCW2 172 aaPredicted RBP6.45□□□□□ -1.38
COL28A1-205ENST00000453441 LCE1DQ5T752 114 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 MORN5Q5VZ52 161 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 EBLN2Q6P2I7 272 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 MORN3Q6PF18 240 aaPredicted RBP6.45□□□□□ -1.38
COL28A1-205ENST00000453441 DPPA3Q6W0C5 159 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 LINC00322Q6ZN03 302 aaPredicted RBP6.45□□□□□ -1.38
COL28A1-205ENST00000453441 MIR17HGQ75NE6 70 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 SLC51BQ86UW2 128 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 STHQ8IWL8 128 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 LYPD1Q8N2G4 141 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 MRPL53Q96EL3 112 aaKnown RBP6.45□□□□□ -1.38
COL28A1-205ENST00000453441 FAM167A-AS1Q96KT0 104 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 PAXXQ9BUH6 204 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 AAMDCQ9H7C9 122 aa6.45□□□□□ -1.38
COL28A1-205ENST00000453441 ZNF331Q9NQX6 463 aaPredicted RBP6.45□□□□□ -1.38
COL28A1-205ENST00000453441 TRBV19A0A075B6N1 114 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 TRAV5A0A0B4J249 113 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 CTXND1A0A1B0GTU2 59 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 DUSP14O95147 198 aaKnown RBP6.44□□□□□ -1.38
COL28A1-205ENST00000453441 NBEAP1P0C6P0 100 aa6.44□□□□□ -1.38
COL28A1-205ENST00000453441 STAG3L2P0CL84 134 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms