RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 H3BQ15 152 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ZNF253O75346 499 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CSN3P07498 182 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 UBE2G2P60604 165 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 RANP62826 216 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 RPL11P62913 178 aaKnown RBP9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PSG9Q00887 426 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SHISA2Q6UWI4 295 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TCF24Q7RTU0 167 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 RARRES2Q99969 163 aa9.51□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PGPA6NDG6 321 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 C11orf94C9JXX5 98 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SUMO1P63165 101 aaKnown RBP9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 MEF2BQ02080 365 aaPredicted RBP9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ICAM4Q14773 271 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SAMD13Q5VXD3 122 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 RXFP4Q8TDU9 374 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TREM1Q9NP99 234 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CLEC5AQ9NY25 188 aa9.5□□□□□ -0.89
HLA-DPA1-244ENST00000453337 F6UZH7 168 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PDE6DO43924 150 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SNRPCP09234 159 aaKnown RBP9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PAFAH1B2P68402 229 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 FAM90A2PQ658T7 463 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 DYNLRB2Q8TF09 96 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 C17orf77Q96MU5 243 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CITED4Q96RK1 184 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SLC50A1Q9BRV3 221 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 Q9H3A6 140 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 AAMDCQ9H7C9 122 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 OTORQ9NRC9 128 aa9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 YTHDF2Q9Y5A9 579 aaKnown RBP9.49□□□□□ -0.89
HLA-DPA1-244ENST00000453337 H3BTX0 84 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 NDUFB4O95168 129 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 EDN2P20800 178 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SRSF3P84103 164 aaKnown RBP9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ADAMTSL5Q6ZMM2 481 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 LURAP1LQ8IV03 231 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ARL6IP6Q8N6S5 226 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 LINC00482Q8N8I6 264 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SLC35B3Q9H1N7 401 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 NRN1Q9NPD7 142 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ZNF331Q9NQX6 463 aaPredicted RBP9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 MLXQ9UH92 298 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 PRELID1Q9Y255 219 aa9.48□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TRAV25A0A0B4J276 109 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 TMEM250H0YL14 139 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 DNASE2O00115 360 aaPredicted RBP9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SRP19P09132 144 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 ATP5G3P48201 142 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CD81P60033 236 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 RBPMS2Q6ZRY4 209 aaKnown RBP9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CCDC28AQ8IWP9 274 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 CMTM2Q8TAZ6 248 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 C16orf92Q96LL3 132 aa9.47□□□□□ -0.89
HLA-DPA1-244ENST00000453337 SLC25A5P05141 298 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ID1P41134 155 aa9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CSN1S1P47710 185 aa9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 RPUSD4Q96CM3 377 aaKnown RBP9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 EPDR1Q9UM22 224 aa9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TENM1Q9UKZ4 2725 aa9.46□□□□□ -0.9
HLA-DPA1-244ENST00000453337 IGKV3-7A0A075B6H7 116 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TRAV2A0A0B4J234 112 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GGTLC3B5MD39 225 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 C9JQL5 133 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SLC17A3O00476 420 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 ISLRO14498 428 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 TSPAN4O14817 238 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SAP30O75446 220 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 INSL3P51460 131 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SOHLH1Q5JUK2 328 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 EXOC3-AS1Q8N2X6 119 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 GBGT1Q8N5D6 347 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 OR2K2Q8NGT1 345 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 HIST1H2BAQ96A08 127 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 MCRIP2Q9BUT9 160 aaKnown RBP9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 MS4A6AQ9H2W1 248 aa9.45□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SORL1Q92673 2214 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 FBN1P35555 2871 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 KRBOX1C9JBD0 128 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 K7EQM0 130 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 PSG3Q16557 428 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 WFDC3Q8IUB2 231 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 WFDC9Q8NEX5 89 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 C11orf52Q96A22 123 aa9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 MRPL53Q96EL3 112 aaKnown RBP9.44□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SERTM2A0A1B0GWG4 89 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 K7EQG2 157 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 PEX7O00628 323 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SOCS3O14543 225 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 S100A9P06702 114 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CD33P20138 364 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CEBPGP53567 150 aa9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 SNRPD3P62318 126 aaKnown RBP9.43□□□□□ -0.9
HLA-DPA1-244ENST00000453337 CD300EQ496F6 205 aaPredicted RBP9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms