RNA–Protein interactions for RNA: ENST00000452322.2

LINC00339-205, long intergenic non-protein coding RNA 339, humanhuman

TSL 3

Gene LINC00339, Length 1,391 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-205ENST00000452322 OR51M1Q9H341 326 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 UBQLN2Q9UHD9 624 aa8.86□□□□□ -0.99
LINC00339-205ENST00000452322 UMAD1C9J7I0 102 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 H3BQ15 152 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 OR7C2O60412 319 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 ZNF688P0C7X2 276 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 STAG3L2P0CL84 134 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 STAG3L3P0CL85 134 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 PYYP10082 97 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 PQLC2Q6ZP29 291 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 RAB24Q969Q5 203 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 C16orf92Q96LL3 132 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 SLC50A1Q9BRV3 221 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 PAXXQ9BUH6 204 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 WFDC10AQ9H1F0 79 aa8.85□□□□□ -0.99
LINC00339-205ENST00000452322 CTXND1A0A1B0GTU2 59 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 A8MZ25 164 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 ZNF253O75346 499 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 DEFB131AP59861 70 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 PDE6HQ13956 83 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 PSMG4Q5JS54 123 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 DEFB125Q8N687 156 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 TMED6Q8WW62 240 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 FXYD5Q96DB9 178 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 ZNF503Q96F45 646 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 ZNF331Q9NQX6 463 aaPredicted RBP8.84□□□□□ -0.99
LINC00339-205ENST00000452322 ZNF586Q9NXT0 402 aa8.84□□□□□ -0.99
LINC00339-205ENST00000452322 TRBV19A0A075B6N1 114 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 TRAV8-2A0A0B4J237 113 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 BOLA2-SMG1P6H3BVE0 249 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 EIF3GO75821 320 aaKnown RBP eCLIP8.83□□□□□ -1
LINC00339-205ENST00000452322 SNRPCP09234 159 aaKnown RBP8.83□□□□□ -1
LINC00339-205ENST00000452322 OR10J4P0C629 311 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 NBEAP1P0C6P0 100 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 IGHV4-30-4P0DP06 118 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 UBE2L3P68036 154 aaKnown RBP8.83□□□□□ -1
LINC00339-205ENST00000452322 PRKDCP78527 4128 aaKnown RBP8.83□□□□□ -1
LINC00339-205ENST00000452322 ZNF726P1Q15940 193 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 DPPA3Q6W0C5 159 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 SSX7Q7RTT5 188 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 APRG1Q8IVJ8 170 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 LRRC20Q8TCA0 184 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 MRAPQ8TCY5 172 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 RNF141Q8WVD5 230 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 SAT2Q96F10 170 aaPredicted RBP8.83□□□□□ -1
LINC00339-205ENST00000452322 CLEC5AQ9NY25 188 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 PLA2G2EQ9NZK7 142 aa8.83□□□□□ -1
LINC00339-205ENST00000452322 H3BTX0 84 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 SLC17A3O00476 420 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 HMGB3O15347 200 aaKnown RBP8.82□□□□□ -1
LINC00339-205ENST00000452322 CXorf1O96002 111 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 ARL14EPLP0DKL9 152 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 RAB5CP51148 216 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 PHYHIPLQ96FC7 376 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 LINC00052Q96N35 136 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 CITED4Q96RK1 184 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 SRD5A3Q9H8P0 318 aa8.82□□□□□ -1
LINC00339-205ENST00000452322 NDUFB4O95168 129 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 FHITP49789 147 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 PSG9Q00887 426 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 ZNF124Q15973 351 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 DEFB121Q5J5C9 76 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 IGFL4Q6B9Z1 124 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 BLNKQ8WV28 456 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 C20orf173Q96LM9 149 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 TUBA4BQ9H853 241 aa8.81□□□□□ -1
LINC00339-205ENST00000452322 MAP1LC3B2A6NCE7 125 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 GCHFRP30047 84 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 SULT1A2P50226 295 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 PSG3Q16557 428 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 FOXI2Q6ZQN5 318 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 RNF182Q8N6D2 247 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 FAM213BQ8TBF2 198 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 SUN5Q8TC36 379 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 MAP1LC3BQ9GZQ8 125 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 TMEM167BQ9NRX6 74 aa8.8□□□□□ -1
LINC00339-205ENST00000452322 FRMD6-AS1P0C7T7 363 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 HLA-DMBP28068 263 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 LINC00322Q6ZN03 302 aaPredicted RBP8.79□□□□□ -1
LINC00339-205ENST00000452322 STHQ8IWL8 128 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 LYPD1Q8N2G4 141 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 ZNF738Q8NE65 137 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 MBD3L1Q8WWY6 194 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 MRPL53Q96EL3 112 aaKnown RBP8.79□□□□□ -1
LINC00339-205ENST00000452322 SAV1Q9H4B6 383 aaPredicted RBP8.79□□□□□ -1
LINC00339-205ENST00000452322 AAMDCQ9H7C9 122 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 PRELID1Q9Y255 219 aa8.79□□□□□ -1
LINC00339-205ENST00000452322 LOC102724200A0A096LPH7 203 aaPredicted RBP8.78□□□□□ -1
LINC00339-205ENST00000452322 KNCNA6PVL3 124 aa8.78□□□□□ -1
LINC00339-205ENST00000452322 HLA-DRB4P13762 266 aa8.78□□□□□ -1
LINC00339-205ENST00000452322 FGF8P55075 233 aaPredicted RBP8.78□□□□□ -1
LINC00339-205ENST00000452322 ACTL10Q5JWF8 245 aa8.78□□□□□ -1
LINC00339-205ENST00000452322 EBLN2Q6P2I7 272 aa8.78□□□□□ -1
LINC00339-205ENST00000452322 HLA-DRB4X5D2U9 266 aa8.78□□□□□ -1
LINC00339-205ENST00000452322 A0A0J9YX75 114 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 RBMY1BA6NDE4 496 aaKnown RBP8.77□□□□□ -1.01
LINC00339-205ENST00000452322 RBMY1EA6NEQ0 496 aaKnown RBP8.77□□□□□ -1.01
LINC00339-205ENST00000452322 H3BMM0 161 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 H2AFB1P0C5Y9 115 aa8.77□□□□□ -1.01
LINC00339-205ENST00000452322 RBMY1DP0C7P1 496 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms