RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 HIGD1AQ9Y241 93 aa7.64□□□□□ -1.19
USP1-204ENST00000452143 TRAV12-2A0A075B6T6 113 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 CBY3A6NI87 242 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 HYPMO75409 117 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 NUDT3O95989 172 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 IL5P05113 134 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 LINC00869P0C866 280 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 CXCL2P19875 107 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 CXCL3P19876 107 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 PLP1P60201 277 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 HIST1H1AQ02539 215 aaPredicted RBP7.63□□□□□ -1.19
USP1-204ENST00000452143 PPP1R1AQ13522 171 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 ZNF493Q6ZR52 646 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 OR8A1Q8NGG7 326 aa7.63□□□□□ -1.19
USP1-204ENST00000452143 SMCO3A2RU48 225 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 FNDC10F2Z333 226 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 H3BMQ9 156 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 K7EPK0 472 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 PRM2P04554 102 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 HOXB5P09067 269 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 AZU1P20160 251 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 CDKN1BP46527 198 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 RHOBP62745 196 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 ID3Q02535 119 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 IGFL4Q6B9Z1 124 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
USP1-204ENST00000452143 LINC01587Q99440 93 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 C20orf144Q9BQM9 153 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 KRTAP4-5Q9BYR2 181 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 PPP1R14DQ9NXH3 145 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 TIMM8BQ9Y5J9 83 aaPredicted RBP7.62□□□□□ -1.19
USP1-204ENST00000452143 APOBP04114 4563 aaKnown RBP7.62□□□□□ -1.19
USP1-204ENST00000452143 DNAH5Q8TE73 4624 aa7.62□□□□□ -1.19
USP1-204ENST00000452143 H7BYZ3 331 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 OR5G3P0C626 314 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 DLK1P80370 383 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 CLINT1Q14677 625 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 PSG3Q16557 428 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 PYDC2Q56P42 97 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 TTC32Q5I0X7 151 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 PXDC1Q5TGL8 231 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 LCN15Q6UWW0 184 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 OR10J6PQ8NGY7 276 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 LRRC20Q8TCA0 184 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 RNASE8Q8TDE3 154 aaKnown RBP7.61□□□□□ -1.19
USP1-204ENST00000452143 RNF141Q8WVD5 230 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 UHRF2Q96PU4 802 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 LINC00588Q9Y4M8 146 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 V9GYH0 126 aa7.61□□□□□ -1.19
USP1-204ENST00000452143 PMS2P5A8MQ11 134 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 ADAP1O75689 374 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 POLR2GP62487 172 aaKnown RBP eCLIP7.6□□□□□ -1.19
USP1-204ENST00000452143 SSX7Q7RTT5 188 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 RPUSD4Q96CM3 377 aaKnown RBP7.6□□□□□ -1.19
USP1-204ENST00000452143 SLC50A1Q9BRV3 221 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 ARV1Q9H2C2 271 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 PSENENQ9NZ42 101 aa7.6□□□□□ -1.19
USP1-204ENST00000452143 C9orf170A2RU37 121 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 MRPS12O15235 138 aaKnown RBP7.59□□□□□ -1.19
USP1-204ENST00000452143 SSSCA1O60232 199 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 HTN1P15515 57 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 BTF3P20290 206 aaKnown RBP7.59□□□□□ -1.19
USP1-204ENST00000452143 M6PRP20645 277 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 S100A5P33763 92 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 FCN2Q15485 313 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 TEPPQ6URK8 271 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 TMEM14EPQ6UXP3 125 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 ZNF546Q86UE3 836 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 LINC00612Q8N6U2 182 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 MAPKAPK5-AS1Q8N8E1 139 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 SMIM8Q96KF7 97 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 UPK3BQ9BT76 320 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 ARL6Q9H0F7 186 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 NPVFQ9HCQ7 196 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
USP1-204ENST00000452143 ZNF331Q9NQX6 463 aaPredicted RBP7.59□□□□□ -1.19
USP1-204ENST00000452143 MGAT4CQ9UBM8 478 aa7.59□□□□□ -1.19
USP1-204ENST00000452143 A0A1W2PPQ1 181 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 H3BNG1 76 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 TSC22D2O75157 780 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 ANXA7P20073 488 aaKnown RBP7.58□□□□□ -1.2
USP1-204ENST00000452143 CCDC190Q86UF4 302 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 BPIFA4PQ86YQ2 179 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 OR10P1Q8NGE3 313 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 GNPNAT1Q96EK6 184 aaPredicted RBP7.58□□□□□ -1.2
USP1-204ENST00000452143 Q9H3A6 140 aa7.58□□□□□ -1.2
USP1-204ENST00000452143 TRAV26-1A0A087WT03 109 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 NAP1L6A6NFF2 107 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 NDUFB6O95139 128 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 METTL15P1P0C7V9 234 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 TAS2R30P59541 319 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 RRAS2P62070 204 aaPredicted RBP7.57□□□□□ -1.2
USP1-204ENST00000452143 SLC38A11Q08AI6 406 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 C4orf46Q504U0 113 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 GFI1BQ5VTD9 330 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 PATE2Q6UY27 113 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 CCDC28AQ8IWP9 274 aa7.57□□□□□ -1.2
USP1-204ENST00000452143 RXFP4Q8TDU9 374 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms