RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 IGKV3-7A0A075B6H7 116 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 TRAV5A0A0B4J249 113 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 TRAV25A0A0B4J276 109 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 LINC00862A6NCI5 91 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 TSPAN4O14817 238 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 GP9P14770 177 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 GALR1P47211 349 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 MEOX2P50222 304 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 GUK1Q16774 197 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 AURKAIP1Q9NWT8 199 aaPredicted RBP9.78□□□□□ -0.84
VPS33A-202ENST00000451053 ARL2-SNX15V9GYD0 113 aa9.78□□□□□ -0.84
VPS33A-202ENST00000451053 HELTA6NFD8 242 aa9.77□□□□□ -0.85
VPS33A-202ENST00000451053 EIF3GO75821 320 aaKnown RBP eCLIP9.77□□□□□ -0.85
VPS33A-202ENST00000451053 CD5P06127 495 aa9.77□□□□□ -0.85
VPS33A-202ENST00000451053 HIST1H1EP10412 219 aaKnown RBP9.77□□□□□ -0.85
VPS33A-202ENST00000451053 ATF4P18848 351 aaPredicted RBP9.77□□□□□ -0.85
VPS33A-202ENST00000451053 GBGT1Q8N5D6 347 aa9.77□□□□□ -0.85
VPS33A-202ENST00000451053 SUN5Q8TC36 379 aa9.77□□□□□ -0.85
VPS33A-202ENST00000451053 GNG13Q9P2W3 67 aa9.77□□□□□ -0.85
VPS33A-202ENST00000451053 ZMAT5Q9UDW3 170 aaKnown RBP9.77□□□□□ -0.85
VPS33A-202ENST00000451053 RAB19A4D1S5 217 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 OR10J4P0C629 311 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 PYYP10082 97 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 TFPI2P48307 235 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 RPL11P62913 178 aaKnown RBP9.76□□□□□ -0.85
VPS33A-202ENST00000451053 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 FXYD5Q96DB9 178 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 ZNF503Q96F45 646 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 FAM210AQ96ND0 272 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 SPAG8Q99932 426 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-202ENST00000451053 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
VPS33A-202ENST00000451053 NKX6-2Q9C056 277 aaPredicted RBP9.76□□□□□ -0.85
VPS33A-202ENST00000451053 A0A087X0K7 114 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 NBEAP1P0C6P0 100 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 IGLC2P0DOY2 106 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 BCL2P10415 239 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 CCL20P78556 96 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 PDE6HQ13956 83 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 SAMD13Q5VXD3 122 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 COMMD7Q86VX2 200 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 MS4A6AQ9H2W1 248 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 TMPRSS5Q9H3S3 457 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 SMDT1Q9H4I9 107 aa9.75□□□□□ -0.85
VPS33A-202ENST00000451053 A0A1W2PRE2 83 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 RBFOX3A6NFN3 312 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 K7EIL1 84 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 MRPS12O15235 138 aaKnown RBP9.74□□□□□ -0.85
VPS33A-202ENST00000451053 ZNF253O75346 499 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 CD7P09564 240 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 DEFA6Q01524 100 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 PEA15Q15121 130 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 UQCC3Q6UW78 93 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 WFDC3Q8IUB2 231 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 EIF5A2Q9GZV4 153 aaKnown RBP9.74□□□□□ -0.85
VPS33A-202ENST00000451053 VAX2Q9UIW0 290 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 SMAD5-AS1Q9Y6J3 95 aa9.74□□□□□ -0.85
VPS33A-202ENST00000451053 LOC102723971A0A1B0GUV8 181 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 OR4C46A6NHA9 309 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 DNASE2O00115 360 aaPredicted RBP9.73□□□□□ -0.85
VPS33A-202ENST00000451053 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
VPS33A-202ENST00000451053 CD81P60033 236 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 PSG9Q00887 426 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 MEF2BQ02080 365 aaPredicted RBP9.73□□□□□ -0.85
VPS33A-202ENST00000451053 HAGHQ16775 308 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 TOR2AQ5JU69 321 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 ZNF506Q5JVG8 444 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 CST9LP1Q5W188 147 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 GTSCR1Q86UQ5 136 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 Q8N1Y9 231 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 LYPD1Q8N2G4 141 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 FAM24BQ8N5W8 94 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 DCANP1Q8TF63 244 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 BLNKQ8WV28 456 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 C17orf77Q96MU5 243 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 TCEAL7Q9BRU2 100 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 SLC50A1Q9BRV3 221 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 ZNF586Q9NXT0 402 aa9.73□□□□□ -0.85
VPS33A-202ENST00000451053 DNAH3Q8TD57 4116 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 TRBV19A0A075B6N1 114 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 FAM74A7A6NL05 159 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 H3BQ15 152 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 K7EQG2 157 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 PAGE4O60829 102 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 UBE2G2P60604 165 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 PAFAH1B2P68402 229 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 EIF4E3Q8N5X7 224 aaKnown RBP9.72□□□□□ -0.85
VPS33A-202ENST00000451053 WFDC10AQ9H1F0 79 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 AAMDCQ9H7C9 122 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 C19orf73Q9NVV2 129 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 CLEC5AQ9NY25 188 aa9.72□□□□□ -0.85
VPS33A-202ENST00000451053 TRAV2A0A0B4J234 112 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 C11orf94C9JXX5 98 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 PDE6DO43924 150 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 ODF3L2Q3SX64 289 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 OTORQ9NRC9 128 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 SORL1Q92673 2214 aa9.71□□□□□ -0.86
VPS33A-202ENST00000451053 F6UZH7 168 aa9.7□□□□□ -0.86
VPS33A-202ENST00000451053 SOCS3O14543 225 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms