RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 TMEM37Q8WXS4 190 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 TMEM190Q8WZ59 177 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 DPF1Q92782 380 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 UBE2E2Q96LR5 201 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 SHANK2-AS3Q9BTD1 123 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 C20orf24Q9BUV8 137 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 SLC25A39Q9BZJ4 359 aaPredicted RBP6.27□□□□□ -1.41
NPHP1-208ENST00000449600 NKX6-2Q9C056 277 aaPredicted RBP6.27□□□□□ -1.41
NPHP1-208ENST00000449600 SLC35B3Q9H1N7 401 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 KLK15Q9H2R5 256 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 C16orf95Q9H693 158 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 TMEM231Q9H6L2 316 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 AURKAIP1Q9NWT8 199 aaPredicted RBP6.27□□□□□ -1.41
NPHP1-208ENST00000449600 LYSTQ99698 3801 aa6.27□□□□□ -1.41
NPHP1-208ENST00000449600 LCE6AA0A183 80 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 A0A1W2PS18 150 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 ZNF320A2RRD8 509 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 F6UZH7 168 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 F8W036 122 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 NDUFA4O00483 81 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 PDE6DO43924 150 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 PAGE4O60829 102 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 NDUFA7O95182 113 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 LGALS1P09382 135 aaKnown RBP6.26□□□□□ -1.41
NPHP1-208ENST00000449600 ATF4P18848 351 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-208ENST00000449600 ZP3P21754 424 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 CEBPGP53567 150 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 UBE2G2P60604 165 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 CCL20P78556 96 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 MEF2BQ02080 365 aaPredicted RBP6.26□□□□□ -1.41
NPHP1-208ENST00000449600 SOHLH1Q5JUK2 328 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 TOMM20LQ6UXN7 152 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 OR8I2Q8N0Y5 310 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 GPR82Q96P67 336 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 CHRDL1Q9BU40 450 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 SERTAD4Q9NUC0 356 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 MRPL27Q9P0M9 148 aaKnown RBP6.26□□□□□ -1.41
NPHP1-208ENST00000449600 UFC1Q9Y3C8 167 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 ARL2-SNX15V9GYD0 113 aa6.26□□□□□ -1.41
NPHP1-208ENST00000449600 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 IGHV3-35A0A0C4DH35 117 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 TMEM218A2RU14 115 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 CLPSL1A2RUU4 121 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 ZNF98A6NK75 572 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 ZNF785A8K8V0 405 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 C11orf94C9JXX5 98 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 PPP5D1E7EU14 171 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 H3BRN7 92 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 NDUFS6O75380 124 aaKnown RBP6.25□□□□□ -1.41
NPHP1-208ENST00000449600 EIF3GO75821 320 aaKnown RBP eCLIP6.25□□□□□ -1.41
NPHP1-208ENST00000449600 CD5P06127 495 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 OR10J4P0C629 311 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 SFTA3P0C7M3 94 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 HIST1H1EP10412 219 aaKnown RBP6.25□□□□□ -1.41
NPHP1-208ENST00000449600 GALR1P47211 349 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 PATE2Q6UY27 113 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 SSX7Q7RTT5 188 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 RNF152Q8N8N0 203 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 OR5B12Q96R08 314 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 ELOVL1Q9BW60 279 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 SLC25A2Q9BXI2 301 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 TMEM14CQ9P0S9 112 aa6.25□□□□□ -1.41
NPHP1-208ENST00000449600 A0A1W2PRE2 83 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 TMEM250H0YL14 139 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 NBEAP1P0C6P0 100 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 CDX1P47902 265 aaPredicted RBP6.24□□□□□ -1.41
NPHP1-208ENST00000449600 MEOX2P50222 304 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 ICAM4Q14773 271 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
NPHP1-208ENST00000449600 FAM74A3Q4VXF1 159 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 C1orf194Q5T5A4 169 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 CMTM2Q8TAZ6 248 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 BLNKQ8WV28 456 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 RARRES2Q99969 163 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 TCEAL7Q9BRU2 100 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 SCRT1Q9BWW7 348 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 SEC11CQ9BY50 192 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 AAMDCQ9H7C9 122 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 STAB2Q8WWQ8 2551 aa6.24□□□□□ -1.41
NPHP1-208ENST00000449600 K7EMT4 169 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 K7EQM0 130 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 APOC3P02656 99 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 SRP19P09132 144 aaKnown RBP6.23□□□□□ -1.41
NPHP1-208ENST00000449600 PYYP10082 97 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 CSN1S1P47710 185 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 PSG9Q00887 426 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 LEMD1Q68G75 181 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 GPHB5Q86YW7 130 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 SVBPQ8N300 66 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 KLHL30-AS1Q8NEE0 82 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 C4orf3Q8WVX3 66 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 RPUSD4Q96CM3 377 aaKnown RBP6.23□□□□□ -1.41
NPHP1-208ENST00000449600 FAM167A-AS1Q96KT0 104 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 NIPSNAP3BQ9BS92 247 aa6.23□□□□□ -1.41
NPHP1-208ENST00000449600 TSSC4Q9Y5U2 329 aaPredicted RBP6.23□□□□□ -1.41
NPHP1-208ENST00000449600 CSMD3Q7Z407 3707 aa6.22□□□□□ -1.41
NPHP1-208ENST00000449600 IGHV3OR16-8A0A075B7F1 116 aa6.22□□□□□ -1.41
NPHP1-208ENST00000449600 HELTA6NFD8 242 aa6.22□□□□□ -1.41
NPHP1-208ENST00000449600 FAM74A7A6NL05 159 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms