RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 RPL35P42766 123 aaKnown RBP7.41□□□□□ -1.22
RFC4-210ENST00000449502 GNG4P50150 75 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 TAS2R60P59551 318 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 GNG5P63218 68 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 RHEBQ15382 184 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 AWAT1Q58HT5 328 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 TCTEX1D4Q5JR98 221 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 SAMD13Q5VXD3 122 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 C18orf65Q6ZTR6 163 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 C8orf86Q6ZUL3 223 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 EXOC3-AS1Q8N2X6 119 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 C16orf92Q96LL3 132 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 C17orf77Q96MU5 243 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 CITED2Q99967 270 aaPredicted RBP7.41□□□□□ -1.22
RFC4-210ENST00000449502 ATG101Q9BSB4 218 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 CLEC5AQ9NY25 188 aa7.41□□□□□ -1.22
RFC4-210ENST00000449502 VPS13CQ709C8 3753 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 SERTM2A0A1B0GWG4 89 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 B4DEV8 164 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 CCL24O00175 119 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 CHEK1O14757 476 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 TCRAP04437 139 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 SLURP1P55000 103 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 FOXL1Q12952 345 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 DEFB136Q30KP8 78 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 TCF24Q7RTU0 167 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 GLMPQ8WWB7 406 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 SDF2L1Q9HCN8 221 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 SMAD5-AS1Q9Y6J3 95 aa7.4□□□□□ -1.22
RFC4-210ENST00000449502 ITPR3Q14573 2671 aa7.4□□□□□ -1.23
RFC4-210ENST00000449502 NOTCH2Q04721 2471 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 C9JCJ5 164 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 DNASE2O00115 360 aaPredicted RBP7.39□□□□□ -1.23
RFC4-210ENST00000449502 SLC17A3O00476 420 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 SCO1O75880 301 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 MT-ND4LP03901 98 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 MGST1P10620 155 aaKnown RBP7.39□□□□□ -1.23
RFC4-210ENST00000449502 MYCNOSP40205 109 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 ID1P41134 155 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 PROK1P58294 105 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 PAFAH1B2P68402 229 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 SRSF2Q01130 221 aaKnown RBP7.39□□□□□ -1.23
RFC4-210ENST00000449502 KLF5Q13887 457 aaPredicted RBP7.39□□□□□ -1.23
RFC4-210ENST00000449502 NSUN5P1Q3KNT7 163 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 CENPWQ5EE01 88 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 GOLT1AQ6ZVE7 132 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 BAGE2Q86Y30 109 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 ARL6IP6Q8N6S5 226 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 WIPF2Q8TF74 440 aaPredicted RBP7.39□□□□□ -1.23
RFC4-210ENST00000449502 FMC1Q96HJ9 113 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 DUX3Q96PT4 197 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 BIN3Q9NQY0 253 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 HIVEP2P31629 2446 aa7.39□□□□□ -1.23
RFC4-210ENST00000449502 IGKV3-7A0A075B6H7 116 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 TRAV34A0A0B4J273 112 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 TMEM213A2RRL7 107 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 FBLL1A6NHQ2 334 aaKnown RBP7.38□□□□□ -1.23
RFC4-210ENST00000449502 C2orf70A6NJV1 201 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 A8MWP6 167 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 CBLN1P23435 193 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 RPL23P62829 140 aaKnown RBP7.38□□□□□ -1.23
RFC4-210ENST00000449502 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 TMEM183BQ1AE95 376 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 ATRAIDQ6UW56 229 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 NDUFA11Q86Y39 141 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 OR9G4Q8NGQ1 327 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 C2CD4CQ8TF44 421 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 DERL1Q9BUN8 251 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 NRN1Q9NPD7 142 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 ZNF331Q9NQX6 463 aaPredicted RBP7.38□□□□□ -1.23
RFC4-210ENST00000449502 SMCO4Q9NRQ5 59 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 LY96Q9Y6Y9 160 aa7.38□□□□□ -1.23
RFC4-210ENST00000449502 DIRC3C9JPN6 131 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 PPP1R2P9O14990 202 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 FOLR2P14207 255 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 LCN12Q6JVE5 192 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 RBPMS2Q6ZRY4 209 aaKnown RBP7.37□□□□□ -1.23
RFC4-210ENST00000449502 PRNTQ86SH4 94 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 LINC01551Q86U37 167 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 WFDC3Q8IUB2 231 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 C15orf54Q8N8G6 183 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
RFC4-210ENST00000449502 ZNF738Q8NE65 137 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
RFC4-210ENST00000449502 MRPL53Q96EL3 112 aaKnown RBP7.37□□□□□ -1.23
RFC4-210ENST00000449502 RAX2Q96IS3 184 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 LINC00479Q96M42 142 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 NDFIP1Q9BT67 221 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 CTDSP1Q9GZU7 261 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 AKAP9Q99996 3911 aa7.37□□□□□ -1.23
RFC4-210ENST00000449502 ANK3Q12955 4377 aaKnown RBP7.37□□□□□ -1.23
RFC4-210ENST00000449502 CSMD1Q96PZ7 3565 aa7.36□□□□□ -1.23
RFC4-210ENST00000449502 H7BYZ3 331 aa7.36□□□□□ -1.23
RFC4-210ENST00000449502 M0R3E3 92 aa7.36□□□□□ -1.23
RFC4-210ENST00000449502 OVOL1O14753 267 aa7.36□□□□□ -1.23
RFC4-210ENST00000449502 TSPAN4O14817 238 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms