RNA–Protein interactions for RNA: ENST00000449339.1

AP000253.1-201, humanhuman

TSL 3 BASIC

Gene AP000253.1, Length 2,233 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000253.1-201ENST00000449339 ZNF124Q15973 351 aa12.53□□□□□ -0.4
AP000253.1-201ENST00000449339 MRPL54Q6P161 138 aaKnown RBP12.53□□□□□ -0.4
AP000253.1-201ENST00000449339 WDR73Q6P4I2 378 aa12.53□□□□□ -0.4
AP000253.1-201ENST00000449339 BEX4Q9NWD9 120 aaPredicted RBP12.53□□□□□ -0.4
AP000253.1-201ENST00000449339 A0A1B0GUS0 222 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 IGLV2-11P01706 119 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 MT-ND6P03923 174 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 GPR183P32249 361 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 Q86TA4 180 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 NAT8BQ9UHF3 227 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 GATA3P23771 443 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 LOXL1Q08397 574 aaPredicted RBP12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 COX19Q49B96 90 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 LINC00322Q6ZN03 302 aaPredicted RBP12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 TMEM136Q6ZRR5 245 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 MS4A10Q96PG2 267 aa12.52□□□□□ -0.41
AP000253.1-201ENST00000449339 J3QKU1 62 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 RAB4BP61018 213 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 PDE6HQ13956 83 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 CDPF1Q6NVV7 123 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 TMEM256Q8N2U0 113 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 GBGT1Q8N5D6 347 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 NUP35Q8NFH5 326 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 TSKUQ8WUA8 353 aa12.51□□□□□ -0.41
AP000253.1-201ENST00000449339 IGHV3-35A0A0C4DH35 117 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 A6NDX4 124 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 CLEC3BP05452 202 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 CRISP2P16562 243 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 TMEM18Q96B42 140 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 NEU1Q99519 415 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 RABAC1Q9UI14 185 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 IGHV4-31P0DP07 118 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 PRNTQ86SH4 94 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 Q96MF0 132 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 PRSS22Q9GZN4 317 aa12.5□□□□□ -0.41
AP000253.1-201ENST00000449339 C19orf71A6NCJ1 209 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 HIGD1CA8MV81 97 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 P01737 135 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 RPL7P18124 248 aaKnown RBP12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 DEFA6Q01524 100 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 RPP21Q9H633 154 aaKnown RBP12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 ZNF331Q9NQX6 463 aaPredicted RBP12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 ZNF492Q9P255 531 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 CREBBPQ92793 2442 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 TEX15Q9BXT5 2789 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 PRRC2AP48634 2157 aaKnown RBP12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 IGHV3OR16-8A0A075B7F1 116 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 K7EQM0 130 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 M0R3E3 92 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 BMPR1BO00238 502 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 HLA-DQA1P01909 254 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 Q6ZS46 218 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 KRTAP1-3Q8IUG1 177 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 LRRC75A-AS1Q8N1F1 130 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 CIARTQ8N365 385 aaPredicted RBP12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 CCDC140Q96MF4 163 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 AAMDCQ9H7C9 122 aa12.49□□□□□ -0.41
AP000253.1-201ENST00000449339 TRAV41A0A0B4J266 112 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 TRBV6-1A0A0K0K1D8 114 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 NUPR1O60356 82 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 BLCAPP62952 87 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 DEFB112Q30KQ8 113 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 RASL11AQ6T310 242 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 DAZAP1Q96EP5 407 aaKnown RBP12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 TP53TG3Q9ULZ0 132 aa12.48□□□□□ -0.41
AP000253.1-201ENST00000449339 CT83Q5H943 113 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 TOMM20LQ6UXN7 152 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 WIPF2Q8TF74 440 aaPredicted RBP12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 NOL4LQ96MY1 436 aaPredicted RBP12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 DIRC3C9JPN6 131 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 PRB4P10163 310 aaPredicted RBP12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 JOSD1Q15040 202 aaPredicted RBP12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 PSG3Q16557 428 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 CLEC19AQ6UXS0 136 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 Q71RC1 249 aaPredicted RBP12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 EEF1AKMT3Q96AZ1 226 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 PSMG3-AS1Q96PY0 264 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 GNB4Q9HAV0 340 aa12.47□□□□□ -0.41
AP000253.1-201ENST00000449339 A8MWL6 223 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 J3QLI3 93 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 S100A7P31151 101 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 PSG9Q00887 426 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 KIAA1644Q3SXP7 199 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 C19orf54Q5BKX5 351 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 DNLZQ5SXM8 178 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 ZFAND3Q9H8U3 227 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 ZFP30Q9Y2G7 519 aa12.46□□□□□ -0.41
AP000253.1-201ENST00000449339 TRBV7-1A0A0A6YYK4 115 aa12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 IGHV4-59P01825 116 aa12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 Q0VG73 95 aa12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 PSG8Q9UQ74 426 aa12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 ITPR3Q14573 2671 aa12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 ZNF469Q96JG9 3925 aaPredicted RBP12.46□□□□□ -0.42
AP000253.1-201ENST00000449339 CCDC168Q8NDH2 2452 aa12.45□□□□□ -0.42
AP000253.1-201ENST00000449339 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
AP000253.1-201ENST00000449339 APCSP02743 223 aa12.45□□□□□ -0.42
AP000253.1-201ENST00000449339 GZMBP10144 247 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms