RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 PAGE4O60829 102 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 PPT1P50897 306 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 RANP62826 216 aaKnown RBP11.03□□□□□ -0.64
TNF-208ENST00000449264 DEFB114Q30KQ6 69 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 TOR2AQ5JU69 321 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 CST9LP1Q5W188 147 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 FAM90A2PQ658T7 463 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 WFDC3Q8IUB2 231 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 MANBALQ9NQG1 85 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 SIGLEC8Q9NYZ4 499 aa11.03□□□□□ -0.64
TNF-208ENST00000449264 YTHDF2Q9Y5A9 579 aaKnown RBP11.03□□□□□ -0.64
TNF-208ENST00000449264 BCL2P10415 239 aa11.02□□□□□ -0.64
TNF-208ENST00000449264 GUK1Q16774 197 aa11.02□□□□□ -0.64
TNF-208ENST00000449264 IGFL4Q6B9Z1 124 aa11.02□□□□□ -0.64
TNF-208ENST00000449264 SUN5Q8TC36 379 aa11.02□□□□□ -0.64
TNF-208ENST00000449264 EIF5A2Q9GZV4 153 aaKnown RBP11.02□□□□□ -0.64
TNF-208ENST00000449264 MS4A6AQ9H2W1 248 aa11.02□□□□□ -0.64
TNF-208ENST00000449264 FAM74A7A6NL05 159 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 DNASE2O00115 360 aaPredicted RBP11.01□□□□□ -0.65
TNF-208ENST00000449264 NDUFB4O95168 129 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 CD5P06127 495 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 ATP5G3P48201 142 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 PDE6HQ13956 83 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 EXOC3-AS1Q8N2X6 119 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 C16orf92Q96LL3 132 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 FAM210AQ96ND0 272 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 RARRES2Q99969 163 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 Q9H3A6 140 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 PKD1L1Q8TDX9 2849 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 LOC102723971A0A1B0GUV8 181 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 IZUMO1RA6ND01 250 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 RBFOX3A6NFN3 312 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 GGTLC3B5MD39 225 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 MEOX2P50222 304 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 COMMD7Q86VX2 200 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 RNF182Q8N6D2 247 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 SORL1Q92673 2214 aa11.01□□□□□ -0.65
TNF-208ENST00000449264 A0A1W2PRE2 83 aa11□□□□□ -0.65
TNF-208ENST00000449264 C11orf94C9JXX5 98 aa11□□□□□ -0.65
TNF-208ENST00000449264 IGLV1-51P01701 117 aa11□□□□□ -0.65
TNF-208ENST00000449264 PRB4P10163 310 aaPredicted RBP11□□□□□ -0.65
TNF-208ENST00000449264 HLA-DMBP28068 263 aa11□□□□□ -0.65
TNF-208ENST00000449264 PAFAH1B2P68402 229 aa11□□□□□ -0.65
TNF-208ENST00000449264 ICAM4Q14773 271 aa11□□□□□ -0.65
TNF-208ENST00000449264 GUCA2BQ16661 112 aa11□□□□□ -0.65
TNF-208ENST00000449264 C9orf66Q5T8R8 295 aa11□□□□□ -0.65
TNF-208ENST00000449264 RXFP4Q8TDU9 374 aa11□□□□□ -0.65
TNF-208ENST00000449264 SLC50A1Q9BRV3 221 aa11□□□□□ -0.65
TNF-208ENST00000449264 AAMDCQ9H7C9 122 aa11□□□□□ -0.65
TNF-208ENST00000449264 ZNF331Q9NQX6 463 aaPredicted RBP11□□□□□ -0.65
TNF-208ENST00000449264 RPH3ALQ9UNE2 315 aa11□□□□□ -0.65
TNF-208ENST00000449264 TSPAN4O14817 238 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 IGLL1P15814 213 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 SUMO1P63165 101 aaKnown RBP10.99□□□□□ -0.65
TNF-208ENST00000449264 PSG9Q00887 426 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 DCANP1Q8TF63 244 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 MCRIP2Q9BUT9 160 aaKnown RBP10.99□□□□□ -0.65
TNF-208ENST00000449264 OTORQ9NRC9 128 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 VAX2Q9UIW0 290 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 ARL2-SNX15V9GYD0 113 aa10.99□□□□□ -0.65
TNF-208ENST00000449264 TRAV8-2A0A0B4J237 113 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 LINC00862A6NCI5 91 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 PGPA6NDG6 321 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 SOCS3O14543 225 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 ZNF253O75346 499 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 SRSF3P84103 164 aaKnown RBP10.98□□□□□ -0.65
TNF-208ENST00000449264 MEF2BQ02080 365 aaPredicted RBP10.98□□□□□ -0.65
TNF-208ENST00000449264 PMS2P11Q13670 270 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 ZNF506Q5JVG8 444 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 WFDC9Q8NEX5 89 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 CMYA5Q8N3K9 4069 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 TRAV25A0A0B4J276 109 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 M0R3E3 92 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 SLC25A5P05141 298 aaKnown RBP10.98□□□□□ -0.65
TNF-208ENST00000449264 LCN12Q6JVE5 192 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 FAM24BQ8N5W8 94 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 LINC00052Q96N35 136 aa10.98□□□□□ -0.65
TNF-208ENST00000449264 SPAG8Q99932 426 aaPredicted RBP10.98□□□□□ -0.65
TNF-208ENST00000449264 K7EQG2 157 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 ISLRO14498 428 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 ZNF688P0C7X2 276 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 TAGLN2P37802 199 aaKnown RBP10.97□□□□□ -0.65
TNF-208ENST00000449264 INSL3P51460 131 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 GNG5P63218 68 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 LYPD1Q8N2G4 141 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 CMTM2Q8TAZ6 248 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 MED9Q9NWA0 146 aa10.97□□□□□ -0.65
TNF-208ENST00000449264 RAB19A4D1S5 217 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 OR4C46A6NHA9 309 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 ZNF705FA8MVS1 300 aaPredicted RBP10.96□□□□□ -0.65
TNF-208ENST00000449264 ID1P41134 155 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 CEBPGP53567 150 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 CD81P60033 236 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 SAMD13Q5VXD3 122 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 OR2K2Q8NGT1 345 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 C20orf173Q96LM9 149 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 NKX6-2Q9C056 277 aaPredicted RBP10.96□□□□□ -0.65
TNF-208ENST00000449264 TREM1Q9NP99 234 aa10.96□□□□□ -0.65
TNF-208ENST00000449264 SCO2A0A1W2PP80 73 aa10.95□□□□□ -0.66
TNF-208ENST00000449264 SNRPD3P62318 126 aaKnown RBP10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms