RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 TEX46H3BTG2 121 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
SHANK2-210ENST00000449116 HBE1P02100 147 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 SNRPCP09234 159 aaKnown RBP10.99□□□□□ -0.65
SHANK2-210ENST00000449116 NBEAP1P0C6P0 100 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 GCHFRP30047 84 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 GUCA2BQ16661 112 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 OXLD1Q5BKU9 147 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 SAMD13Q5VXD3 122 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF767PQ75MW2 155 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 TMEM167BQ9NRX6 74 aa10.99□□□□□ -0.65
SHANK2-210ENST00000449116 TRBV19A0A075B6N1 114 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 TRAV1-1A0A0B4J248 108 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 A0A1B0GV50 99 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 OR4C46A6NHA9 309 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 H3BTX0 84 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 TFPI2P48307 235 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 PDE6HQ13956 83 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 WFDC3Q8IUB2 231 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 IQCF2Q8IXL9 164 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 SUN5Q8TC36 379 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 DCANP1Q8TF63 244 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 BLNKQ8WV28 456 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 TMPRSS5Q9H3S3 457 aa10.98□□□□□ -0.65
SHANK2-210ENST00000449116 K7EQG2 157 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 SOCS3O14543 225 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF253O75346 499 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 SAMD5Q5TGI4 173 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 C16orf92Q96LL3 132 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 SLC50A1Q9BRV3 221 aa10.97□□□□□ -0.65
SHANK2-210ENST00000449116 SLC17A3O00476 420 aa10.96□□□□□ -0.65
SHANK2-210ENST00000449116 ID1P41134 155 aa10.96□□□□□ -0.65
SHANK2-210ENST00000449116 PSMB3P49720 205 aa10.96□□□□□ -0.65
SHANK2-210ENST00000449116 PSG9Q00887 426 aa10.96□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF331Q9NQX6 463 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-210ENST00000449116 ZNF256Q9Y2P7 627 aaPredicted RBP10.96□□□□□ -0.65
SHANK2-210ENST00000449116 TRAV8-2A0A0B4J237 113 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 G3V4G9 280 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 ISLRO14498 428 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 NDUFB4O95168 129 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 NMBP08949 121 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 PPT1P50897 306 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 RAB14P61106 215 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 EGFEM1PQ0D2K5 195 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 BEAN1Q3B7T3 259 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 LYPD6BQ8NI32 183 aa10.95□□□□□ -0.66
SHANK2-210ENST00000449116 ZMAT5Q9UDW3 170 aaKnown RBP10.95□□□□□ -0.66
SHANK2-210ENST00000449116 SNRPD3P62318 126 aaKnown RBP10.94□□□□□ -0.66
SHANK2-210ENST00000449116 RANP62826 216 aaKnown RBP10.94□□□□□ -0.66
SHANK2-210ENST00000449116 CCL20P78556 96 aa10.94□□□□□ -0.66
SHANK2-210ENST00000449116 LYPD1Q8N2G4 141 aa10.94□□□□□ -0.66
SHANK2-210ENST00000449116 FAM24BQ8N5W8 94 aa10.94□□□□□ -0.66
SHANK2-210ENST00000449116 PCNPQ8WW12 178 aaKnown RBP10.94□□□□□ -0.66
SHANK2-210ENST00000449116 AAMDCQ9H7C9 122 aa10.94□□□□□ -0.66
SHANK2-210ENST00000449116 CLEC5AQ9NY25 188 aa10.94□□□□□ -0.66
SHANK2-210ENST00000449116 A0A1W2PRE2 83 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 RGS13O14921 159 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 ZNF688P0C7X2 276 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 IGFL4Q6B9Z1 124 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 LINC00052Q96N35 136 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 Q9H3A6 140 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 OTORQ9NRC9 128 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 ARL2-SNX15V9GYD0 113 aa10.93□□□□□ -0.66
SHANK2-210ENST00000449116 FAM74A7A6NL05 159 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 CMC4P56277 68 aaPredicted RBP10.92□□□□□ -0.66
SHANK2-210ENST00000449116 KRTAP10-11P60412 298 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 UBE2G2P60604 165 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 PMS2P11Q13670 270 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 PSMG4Q5JS54 123 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 CLLU1Q5K131 121 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 GTSCR1Q86UQ5 136 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 RNF182Q8N6D2 247 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 MAP6D1Q9H9H5 199 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 MANBALQ9NQG1 85 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 GNG13Q9P2W3 67 aa10.92□□□□□ -0.66
SHANK2-210ENST00000449116 IFNA1P01562 189 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 CD7P09564 240 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 HLA-DMBP28068 263 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 CD81P60033 236 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 ICAM4Q14773 271 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 PSG3Q16557 428 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 ODF3L2Q3SX64 289 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 C20orf173Q96LM9 149 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 FAM110AQ9BQ89 295 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 NKX6-2Q9C056 277 aaPredicted RBP10.91□□□□□ -0.66
SHANK2-210ENST00000449116 PRELID1Q9Y255 219 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 YTHDF2Q9Y5A9 579 aaKnown RBP10.91□□□□□ -0.66
SHANK2-210ENST00000449116 PKD1L1Q8TDX9 2849 aa10.91□□□□□ -0.66
SHANK2-210ENST00000449116 PGPA6NDG6 321 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 OR11H12B2RN74 326 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 PAGE4O60829 102 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 DEFB131AP59861 70 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 CST9LP1Q5W188 147 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 ZNF738Q8NE65 137 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 MRPL53Q96EL3 112 aaKnown RBP10.9□□□□□ -0.66
SHANK2-210ENST00000449116 SORL1Q92673 2214 aa10.9□□□□□ -0.66
SHANK2-210ENST00000449116 MGAM2Q2M2H8 2515 aa10.9□□□□□ -0.67
SHANK2-210ENST00000449116 GGTLC3B5MD39 225 aa10.89□□□□□ -0.67
SHANK2-210ENST00000449116 M0R3E3 92 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms