RNA–Protein interactions for RNA: ENST00000447784.1

LINC00408-201, long intergenic non-protein coding RNA 408, humanhuman

TSL 5 BASIC

Gene LINC00408, Length 560 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00408-201ENST00000447784 ISLRO14498 428 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 HMGB3O15347 200 aaKnown RBP8.66□□□□□ -1.02
LINC00408-201ENST00000447784 SNRPCP09234 159 aaKnown RBP8.66□□□□□ -1.02
LINC00408-201ENST00000447784 CD7P09564 240 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 OR10J4P0C629 311 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 ZNF688P0C7X2 276 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 PSMB3P49720 205 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 RAB5CP51148 216 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 UBE2L3P68036 154 aaKnown RBP8.66□□□□□ -1.02
LINC00408-201ENST00000447784 LCN15Q6UWW0 184 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 DPPA3Q6W0C5 159 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 FAM213BQ8TBF2 198 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 PHYHIPLQ96FC7 376 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 FAM167A-AS1Q96KT0 104 aa8.66□□□□□ -1.02
LINC00408-201ENST00000447784 CTXND1A0A1B0GTU2 59 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 H3BQ15 152 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 H3BTX0 84 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 CXorf1O96002 111 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 NBEAP1P0C6P0 100 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 IGLC2P0DOY2 106 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 PYYP10082 97 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 DEFB131AP59861 70 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 PSG9Q00887 426 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 PSMG4Q5JS54 123 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 BLNKQ8WV28 456 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 SLC50A1Q9BRV3 221 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 AAMDCQ9H7C9 122 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 TUBA4BQ9H853 241 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 CLEC5AQ9NY25 188 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 UBQLN2Q9UHD9 624 aa8.65□□□□□ -1.02
LINC00408-201ENST00000447784 TGP01266 2768 aa8.65□□□□□ -1.03
LINC00408-201ENST00000447784 TRBV19A0A075B6N1 114 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 TEX46H3BTG2 121 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 MRPS12O15235 138 aaKnown RBP8.64□□□□□ -1.03
LINC00408-201ENST00000447784 EIF3GO75821 320 aaKnown RBP eCLIP8.64□□□□□ -1.03
LINC00408-201ENST00000447784 STAG3L2P0CL84 134 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 STAG3L3P0CL85 134 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 FAM110AQ9BQ89 295 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 MAP6D1Q9H9H5 199 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF586Q9NXT0 402 aa8.64□□□□□ -1.03
LINC00408-201ENST00000447784 MAP1LC3B2A6NCE7 125 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF253O75346 499 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 H2AFB1P0C5Y9 115 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 ARL14EPLP0DKL9 152 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 PDE6HQ13956 83 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 EBLN2Q6P2I7 272 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 Q8N1Y9 231 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 FAM24BQ8N5W8 94 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 DEFB125Q8N687 156 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 SFT2D1Q8WV19 159 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 FXYD5Q96DB9 178 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 MAP1LC3BQ9GZQ8 125 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF331Q9NQX6 463 aaPredicted RBP8.63□□□□□ -1.03
LINC00408-201ENST00000447784 TMEM167BQ9NRX6 74 aa8.63□□□□□ -1.03
LINC00408-201ENST00000447784 SOCS3O14543 225 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 NHLRC4P0CG21 123 aaPredicted RBP8.62□□□□□ -1.03
LINC00408-201ENST00000447784 GCHFRP30047 84 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 FHITP49789 147 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 SULT1A2P50226 295 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 RANP62826 216 aaKnown RBP8.62□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF726P1Q15940 193 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 ODF3L2Q3SX64 289 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 FAM74A1Q5RGS3 127 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 IGFL4Q6B9Z1 124 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 ALKAL2Q6UX46 152 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 APRG1Q8IVJ8 170 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF738Q8NE65 137 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 SRD5A3Q9H8P0 318 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 PRELID1Q9Y255 219 aa8.62□□□□□ -1.03
LINC00408-201ENST00000447784 TRAV8-2A0A0B4J237 113 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF705EA8MWA4 302 aaPredicted RBP8.61□□□□□ -1.03
LINC00408-201ENST00000447784 HBE1P02100 147 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 CSN1S1P47710 185 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 FGF8P55075 233 aaPredicted RBP8.61□□□□□ -1.03
LINC00408-201ENST00000447784 PSG3Q16557 428 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 ACTL10Q5JWF8 245 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 LYPD1Q8N2G4 141 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 RNF182Q8N6D2 247 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 MBD3L1Q8WWY6 194 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 SAT2Q96F10 170 aaPredicted RBP8.61□□□□□ -1.03
LINC00408-201ENST00000447784 ZNF503Q96F45 646 aa8.61□□□□□ -1.03
LINC00408-201ENST00000447784 A0A1B0GV50 99 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 KNCNA6PVL3 124 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 SLC17A3O00476 420 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 NDUFB4O95168 129 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 IFNA7P01567 189 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 IGHV4-30-4P0DP06 118 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 BLOC1S1P78537 153 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 ICAM4Q14773 271 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 SSX7Q7RTT5 188 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 STHQ8IWL8 128 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 CMTM2Q8TAZ6 248 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 RPUSD4Q96CM3 377 aaKnown RBP8.6□□□□□ -1.03
LINC00408-201ENST00000447784 WFDC10AQ9H1F0 79 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 C19orf73Q9NVV2 129 aa8.6□□□□□ -1.03
LINC00408-201ENST00000447784 DUSP14O95147 198 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms