RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ENY2Q9NPA8 101 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 CCL28Q9NRJ3 127 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SPANXB1Q9NS25 103 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 MED29Q9NX70 200 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 HIGD1BQ9P298 99 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 SS18L2Q9UHA2 77 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 ZNF835Q9Y2P0 537 aa3.34□□□□□ -1.87
HMGB1P16-201ENST00000447155 MED12LQ86YW9 2145 aa3.34□□□□□ -1.88
HMGB1P16-201ENST00000447155 A8MWL6 223 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 K7EN84 100 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 SNCGO76070 127 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHV3-7P01780 117 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CYBAP13498 195 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 GABRG2P18507 467 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 KIR2DS2P43631 304 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 EDDM3BP56851 147 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL32P62910 135 aaKnown RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC35B1P78383 322 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG7Q13046 419 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 RUNX3Q13761 415 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TAL2Q16559 108 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 POU2AF1Q16633 256 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LGALS9BQ3B8N2 356 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LINC01620Q4KN68 170 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 GCSAMLQ5JQS6 135 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CARD17Q5XLA6 110 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM42Q69YG0 159 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6AWC8 147 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 LGALS9CQ6DKI2 356 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 C2orf91Q6ZV80 131 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q8IYB0 196 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 BOD1L2Q8IYS8 172 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZADH2Q8N4Q0 377 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 OR10X1Q8NGY0 326 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CT55Q8WUE5 264 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 OXGR1Q96P68 337 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 CDX2Q99626 313 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 HINT2Q9BX68 163 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 TMEM126AQ9H061 195 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 NXF5Q9H1B4 397 aaKnown RBP3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 MAP1LC3AQ9H492 121 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 DEC1Q9P2X7 70 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG8Q9UQ74 426 aa3.33□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-13A0A0B4J2D9 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A0G2JRQ6 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CENPVL3A0A0U1RRI6 287 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRD5 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRF3 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1W2PRM7 423 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 HIGD1CA8MV81 97 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 H3BMG7 143 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FCN3O75636 299 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-5P01602 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1-13P0DP09 117 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 NPPCP23582 126 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ASIPP42127 132 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 DSCR10P59022 87 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL30P62888 115 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 UBE2L3P68036 154 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FXYD3Q14802 87 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CST6Q15828 149 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 CEACAM21Q3KPI0 293 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 C5orf47Q569G3 176 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 FAM120AOSQ5T036 256 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 Q6ZUT4 128 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPRMLQ8N4K4 120 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 TYMSOSQ8TAI1 123 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 PPDPFLQ8WWR9 84 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RLN3Q8WXF3 142 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RAB37Q96AX2 223 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ELSPBP1Q96BH3 223 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 ZNF414Q96IQ9 312 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 TPPP3Q9BW30 176 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RAB1BQ9H0U4 201 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPP21Q9H633 154 aaKnown RBP3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 HILPDAQ9Y5L2 63 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 PCDH15Q96QU1 1955 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 AGRNO00468 2067 aa3.32□□□□□ -1.88
HMGB1P16-201ENST00000447155 C2orf16Q68DN1 1984 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PTPRSQ13332 1948 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGKV1D-43A0A0B4J1Z2 117 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPAARA0A1B0GVQ0 90 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1B0GWB2 263 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 A0A1B0GXF2 115 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SLC31A1O15431 190 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 DUX1O43812 170 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 SPINK4O60575 86 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 P01737 135 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 IGHG4P01861 327 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 CLPSP04118 112 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 NMUP48645 174 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 RPL8P62917 257 aaKnown RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 GNG3P63215 75 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 MEF2CQ06413 473 aaPredicted RBP3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PSG5Q15238 335 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 GUSBP1Q15486 140 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PRR22Q8IZ63 422 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 PIFOQ8TCI5 191 aa3.31□□□□□ -1.88
HMGB1P16-201ENST00000447155 LRRC29Q8WV35 223 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms