RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 TEX15Q9BXT5 2789 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 RPL7P18124 248 aaKnown RBP13.51□□□□□ -0.25
SMC6-206ENST00000446852 SMAD5-AS1Q9Y6J3 95 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 CLPSL1A2RUU4 121 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 TGFAP01135 160 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 ATP5G2Q06055 141 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 PRNTQ86SH4 94 aa13.51□□□□□ -0.25
SMC6-206ENST00000446852 MRPL18Q9H0U6 180 aaKnown RBP13.51□□□□□ -0.25
SMC6-206ENST00000446852 LOXL1Q08397 574 aaPredicted RBP13.5□□□□□ -0.25
SMC6-206ENST00000446852 TMEM190Q8WZ59 177 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 GRAMD2BQ96HH9 432 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 CREBBPQ92793 2442 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 DOPEY2Q9Y3R5 2298 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 C19orf71A6NCJ1 209 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 FAM223BA6NKX1 122 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 SNURFLB1AK76 121 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 TRGV3P03979 118 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 S100A2P29034 98 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 PPIFP30405 207 aaKnown RBP13.5□□□□□ -0.25
SMC6-206ENST00000446852 DEFB113Q30KQ7 82 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 FAM223AQ8IWN6 122 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 CIARTQ8N365 385 aaPredicted RBP13.5□□□□□ -0.25
SMC6-206ENST00000446852 TMEM75Q8N9X5 138 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 ASCL2Q99929 193 aa13.5□□□□□ -0.25
SMC6-206ENST00000446852 ZNF469Q96JG9 3925 aaPredicted RBP13.5□□□□□ -0.25
SMC6-206ENST00000446852 DIRC3C9JPN6 131 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 M0QZK8 103 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 FABP4P15090 132 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 MRPL54Q6P161 138 aaKnown RBP13.49□□□□□ -0.25
SMC6-206ENST00000446852 HIST1H2BLQ99880 126 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 PRSS22Q9GZN4 317 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 TRBV6-1A0A0K0K1D8 114 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 IZUMO1RA6ND01 250 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 DEFB112Q30KQ8 113 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 OR10D4PQ8NGN7 298 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 GNB1LQ9BYB4 327 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 AAMDCQ9H7C9 122 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 BEX4Q9NWD9 120 aaPredicted RBP13.49□□□□□ -0.25
SMC6-206ENST00000446852 ZNF492Q9P255 531 aa13.49□□□□□ -0.25
SMC6-206ENST00000446852 A0A1B0GUS0 222 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 J3QLI3 93 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 ZNF785A8K8V0 405 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 BUB3O43684 328 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 IGHV4-59P01825 116 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 PSG3Q16557 428 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 Q5PR19 223 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 TMEM136Q6ZRR5 245 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 NUP35Q8NFH5 326 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 TSKUQ8WUA8 353 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 NEU1Q99519 415 aa13.48□□□□□ -0.25
SMC6-206ENST00000446852 PCP4L1A6NKN8 68 aa13.47□□□□□ -0.25
SMC6-206ENST00000446852 IGHV4-31P0DP07 118 aa13.47□□□□□ -0.25
SMC6-206ENST00000446852 TPPP2P59282 170 aa13.47□□□□□ -0.25
SMC6-206ENST00000446852 RPP21Q9H633 154 aaKnown RBP13.47□□□□□ -0.25
SMC6-206ENST00000446852 PSG9Q00887 426 aa13.47□□□□□ -0.25
SMC6-206ENST00000446852 PSG8Q9UQ74 426 aa13.47□□□□□ -0.25
SMC6-206ENST00000446852 PRRC2AP48634 2157 aaKnown RBP13.46□□□□□ -0.25
SMC6-206ENST00000446852 IGHV3-66A0A0C4DH42 116 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 GRIFINA4D1Z8 144 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 K7EQM0 130 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 P01737 135 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 APOHP02749 345 aaPredicted RBP13.46□□□□□ -0.25
SMC6-206ENST00000446852 PYY3Q5JQD4 70 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 IGFL4Q6B9Z1 124 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 ZC2HC1AQ96GY0 325 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 ATP6V0BQ99437 205 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 NAT8BQ9UHF3 227 aa13.46□□□□□ -0.25
SMC6-206ENST00000446852 IGHV3OR16-13A0A075B7E8 117 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 IGHV3-74A0A0B4J1X5 117 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 HIGD1CA8MV81 97 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 TRBV12-3P01733 135 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 IGHG4P01861 327 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 AMBPP02760 352 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 RPL19P84098 196 aaKnown RBP13.46□□□□□ -0.26
SMC6-206ENST00000446852 WDR73Q6P4I2 378 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 KLK15Q9H2R5 256 aa13.46□□□□□ -0.26
SMC6-206ENST00000446852 ZNF207O43670 478 aaKnown RBP13.45□□□□□ -0.26
SMC6-206ENST00000446852 HLA-DMBP28068 263 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 S100A7P31151 101 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 RELQ04864 619 aaPredicted RBP13.45□□□□□ -0.26
SMC6-206ENST00000446852 LRRC75A-AS1Q8N1F1 130 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 PACRGQ96M98 296 aaPredicted RBP13.45□□□□□ -0.26
SMC6-206ENST00000446852 ITPR3Q14573 2671 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 NPIPB6E9PJ23 425 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 BRI3O95415 125 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 MT-ND6P03923 174 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 TCF24Q7RTU0 167 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 ZFP30Q9Y2G7 519 aa13.45□□□□□ -0.26
SMC6-206ENST00000446852 IGHV3-49A0A0A0MS15 119 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 ZNF253O75346 499 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 FSHBP01225 129 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 RAB4BP61018 213 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 CT83Q5H943 113 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 LCNL1Q6ZST4 164 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 TMEM256Q8N2U0 113 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 GTSF1Q8WW33 167 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 NIT2Q9NQR4 276 aa13.44□□□□□ -0.26
SMC6-206ENST00000446852 ZNF331Q9NQX6 463 aaPredicted RBP13.44□□□□□ -0.26
SMC6-206ENST00000446852 IGKV2-40A0A087WW87 121 aaPredicted RBP13.44□□□□□ -0.26
SMC6-206ENST00000446852 H3BUA1 57 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms