RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 G3V4G9 280 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 WIPF1O43516 503 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 GCHFRP30047 84 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 MEOX2P50222 304 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 UBE2L3P68036 154 aaKnown RBP13.06□□□□□ -0.32
SGCE-206ENST00000445866 BLOC1S1P78537 153 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 GUK1Q16774 197 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 FXYD5Q96DB9 178 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 TMPRSS5Q9H3S3 457 aa13.06□□□□□ -0.32
SGCE-206ENST00000445866 OR4C46A6NHA9 309 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 C16orf92Q96LL3 132 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 TRBV19A0A075B6N1 114 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 A0A087X0K7 114 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 TEX46H3BTG2 121 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 DCANP1Q8TF63 244 aa13.05□□□□□ -0.32
SGCE-206ENST00000445866 SAT2Q96F10 170 aaPredicted RBP13.05□□□□□ -0.32
SGCE-206ENST00000445866 ZMAT5Q9UDW3 170 aaKnown RBP13.05□□□□□ -0.32
SGCE-206ENST00000445866 CMYA5Q8N3K9 4069 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 K7EQG2 157 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 ID1P41134 155 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 RANP62826 216 aaKnown RBP13.04□□□□□ -0.32
SGCE-206ENST00000445866 IFITM2Q01629 132 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 IGFL4Q6B9Z1 124 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 TMEM167BQ9NRX6 74 aa13.04□□□□□ -0.32
SGCE-206ENST00000445866 ZNF256Q9Y2P7 627 aaPredicted RBP13.04□□□□□ -0.32
SGCE-206ENST00000445866 TRAV2A0A0B4J234 112 aa13.03□□□□□ -0.32
SGCE-206ENST00000445866 TRAV1-1A0A0B4J248 108 aa13.03□□□□□ -0.32
SGCE-206ENST00000445866 CCL20P78556 96 aa13.03□□□□□ -0.32
SGCE-206ENST00000445866 SAMD5Q5TGI4 173 aa13.03□□□□□ -0.32
SGCE-206ENST00000445866 LINC00052Q96N35 136 aa13.03□□□□□ -0.32
SGCE-206ENST00000445866 HBE1P02100 147 aa13.02□□□□□ -0.32
SGCE-206ENST00000445866 BEAN1Q3B7T3 259 aa13.02□□□□□ -0.32
SGCE-206ENST00000445866 SAMD13Q5VXD3 122 aa13.02□□□□□ -0.32
SGCE-206ENST00000445866 PCNPQ8WW12 178 aaKnown RBP13.02□□□□□ -0.32
SGCE-206ENST00000445866 SLC17A3O00476 420 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 ISLRO14498 428 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 NDUFB4O95168 129 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 KRTAP10-11P60412 298 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 SNRPD3P62318 126 aaKnown RBP13.02□□□□□ -0.33
SGCE-206ENST00000445866 PDE6HQ13956 83 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 FAM24BQ8N5W8 94 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 SUN5Q8TC36 379 aa13.02□□□□□ -0.33
SGCE-206ENST00000445866 TRAV8-2A0A0B4J237 113 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 SOCS3O14543 225 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 ZNF688P0C7X2 276 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 RAB14P61106 215 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 PSG9Q00887 426 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 ZNF767PQ75MW2 155 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 SLC50A1Q9BRV3 221 aa13.01□□□□□ -0.33
SGCE-206ENST00000445866 ZNF331Q9NQX6 463 aaPredicted RBP13.01□□□□□ -0.33
SGCE-206ENST00000445866 ZNF253O75346 499 aa13□□□□□ -0.33
SGCE-206ENST00000445866 PSMB3P49720 205 aa13□□□□□ -0.33
SGCE-206ENST00000445866 EGFEM1PQ0D2K5 195 aa13□□□□□ -0.33
SGCE-206ENST00000445866 RNF182Q8N6D2 247 aa13□□□□□ -0.33
SGCE-206ENST00000445866 MGAM2Q2M2H8 2515 aa13□□□□□ -0.33
SGCE-206ENST00000445866 CD7P09564 240 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 HLA-DMBP28068 263 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 CMC4P56277 68 aaPredicted RBP12.99□□□□□ -0.33
SGCE-206ENST00000445866 UBE2G2P60604 165 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 PSMG4Q5JS54 123 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 GTSCR1Q86UQ5 136 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 LYPD1Q8N2G4 141 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 EXOC3-AS1Q8N2X6 119 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 AAMDCQ9H7C9 122 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 PGPA6NDG6 321 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 DEFB131AP59861 70 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 CD81P60033 236 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 ICAM4Q14773 271 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 PSG3Q16557 428 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 C20orf173Q96LM9 149 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 PRR25Q96S07 402 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 Q9H3A6 140 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 CLEC5AQ9NY25 188 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 GNG13Q9P2W3 67 aa12.99□□□□□ -0.33
SGCE-206ENST00000445866 PPT1P50897 306 aa12.98□□□□□ -0.33
SGCE-206ENST00000445866 SUMO1P63165 101 aaKnown RBP12.98□□□□□ -0.33
SGCE-206ENST00000445866 A0A1W2PRE2 83 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 OR11H12B2RN74 326 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 PAGE4O60829 102 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 NMBP08949 121 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 LYPD6BQ8NI32 183 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 OTORQ9NRC9 128 aa12.97□□□□□ -0.33
SGCE-206ENST00000445866 YTHDF2Q9Y5A9 579 aaKnown RBP12.97□□□□□ -0.33
SGCE-206ENST00000445866 ZNF705FA8MVS1 300 aaPredicted RBP12.96□□□□□ -0.33
SGCE-206ENST00000445866 PRB4P10163 310 aaPredicted RBP12.96□□□□□ -0.33
SGCE-206ENST00000445866 ODF3L2Q3SX64 289 aa12.96□□□□□ -0.33
SGCE-206ENST00000445866 APRG1Q8IVJ8 170 aa12.96□□□□□ -0.33
SGCE-206ENST00000445866 ZNF738Q8NE65 137 aa12.96□□□□□ -0.33
SGCE-206ENST00000445866 MAP6D1Q9H9H5 199 aa12.96□□□□□ -0.33
SGCE-206ENST00000445866 FAM74A7A6NL05 159 aa12.96□□□□□ -0.34
SGCE-206ENST00000445866 M0R3E3 92 aa12.96□□□□□ -0.34
SGCE-206ENST00000445866 PRELID1Q9Y255 219 aa12.96□□□□□ -0.34
SGCE-206ENST00000445866 CSN1S1P47710 185 aa12.95□□□□□ -0.34
SGCE-206ENST00000445866 CMTM2Q8TAZ6 248 aa12.95□□□□□ -0.34
SGCE-206ENST00000445866 RPUSD4Q96CM3 377 aaKnown RBP12.95□□□□□ -0.34
SGCE-206ENST00000445866 NKX6-2Q9C056 277 aaPredicted RBP12.95□□□□□ -0.34
SGCE-206ENST00000445866 IFNA1P01562 189 aa12.94□□□□□ -0.34
SGCE-206ENST00000445866 SLC25A5P05141 298 aaKnown RBP12.94□□□□□ -0.34
SGCE-206ENST00000445866 DEFB1P60022 68 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms