RNA–Protein interactions for RNA: ENST00000444061.7

SMARCA4-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 4,938 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-204ENST00000444061 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 TRGV2A0A075B6R0 118 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BKO60814 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BJP06899 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BOP23527 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BBP33778 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BDP58876 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 YPEL3P61236 119 aaPredicted RBP11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BCP62807 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 GNG5P63218 68 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 SMAGPQ0VAQ4 97 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST2H2BEQ16778 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 ERASQ7Z444 233 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BHQ93079 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BNQ99877 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 HIST1H2BMQ99879 126 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 EPDR1Q9UM22 224 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 SNCGO76070 127 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 SRIP30626 198 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 ZNF56Q15929 161 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 LCN12Q6JVE5 192 aa11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 CIARTQ8N365 385 aaPredicted RBP11.21□□□□□ -0.61
SMARCA4-204ENST00000444061 TCTAP57738 103 aa11.21□□□□□ -0.62
SMARCA4-204ENST00000444061 KCNS1Q96KK3 526 aa11.21□□□□□ -0.62
SMARCA4-204ENST00000444061 TMEM238LA0A1B0GVL6 79 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 A6NJY4 79 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 NPIPB6E9PJ23 425 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 MUC21Q5SSG8 566 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 BCL6BQ8N143 479 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 OR8A1Q8NGG7 326 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 ASCL2Q99929 193 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 CHD3Q12873 2000 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 RPL35AP18077 110 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 SRSF3P84103 164 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 SRSF4Q08170 494 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 MRPL52Q86TS9 123 aaKnown RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 M0R381 172 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 ZNF841Q6ZN19 808 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 USP9YO00507 2555 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 NCKAP5O14513 1909 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 TRBV24-1A0A075B6N3 115 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 LOC102724200A0A096LPH7 203 aaPredicted RBP11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 FABP5P3A8MUU1 101 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 ACTL10Q5JWF8 245 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 WFDC12Q8WWY7 111 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 MYO9AB2RTY4 2548 aa11.2□□□□□ -0.62
SMARCA4-204ENST00000444061 TTC9CQ8N5M4 171 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 MYOZ3Q8TDC0 251 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 IL36BQ9NZH7 164 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 TRAV21A0A0B4J279 112 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 TNFRSF13BO14836 293 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 STAG3L3P0CL85 134 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 SCGB1D4Q6XE38 83 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 SEPSECSQ9HD40 501 aaKnown RBP11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 PSG8Q9UQ74 426 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 NDUFA4O00483 81 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 FCN3O75636 299 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 CD7P09564 240 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 CKS2P33552 79 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 SPATA31B1PQ5VZV4 182 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 NPBQ8NG41 125 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 TCTEX1D4Q5JR98 221 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 HIST3H2BBQ8N257 126 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 VSIRQ9H7M9 311 aa11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 USP9XQ93008 2570 aaPredicted RBP11.19□□□□□ -0.62
SMARCA4-204ENST00000444061 AMMECR1LQ6DCA0 310 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 TMEM70Q9BUB7 260 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 IGHV7-81A0A0B4J1V7 117 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 INAFM1C9JVW0 142 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 NRN1Q9NPD7 142 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 A0A1B0GV72 72 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 TMEM86BQ8N661 226 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 LY6G5BQ8NDX9 201 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 TMEM158Q8WZ71 300 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 GRIFINA4D1Z8 144 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 DEFB131AP59861 70 aa11.18□□□□□ -0.62
SMARCA4-204ENST00000444061 FOXE3Q13461 319 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 C2orf88Q9BSF0 95 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 Q8N9W7 124 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 HIST1H2BLQ99880 126 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 SHANK2-AS3Q9BTD1 123 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 UBE2L6O14933 153 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 KRTAP10-9P60411 292 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 SRSF9Q13242 221 aaKnown RBP eCLIP11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 NIT1Q86X76 327 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 EXOC3-AS1Q8N2X6 119 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 OR10AG1Q8NH19 301 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 NEU1Q99519 415 aa11.17□□□□□ -0.62
SMARCA4-204ENST00000444061 CCL24O00175 119 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 PSMB2P49721 201 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 FBLN7Q53RD9 439 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 C5orf56Q8N8D9 126 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 MBD3L1Q8WWY6 194 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 RPP25LQ8N5L8 163 aaKnown RBP11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 IMMP2LQ96T52 175 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 CYTL1Q9NRR1 136 aa11.16□□□□□ -0.62
SMARCA4-204ENST00000444061 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms