RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 LOXL3P58215 753 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SSBP2P81877 361 aaPredicted RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 CEP295Q9C0D2 2601 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 TRAV8-1A0A0A6YYK1 113 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 B5MCH6 92 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 LYZL1Q6UWQ5 148 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 KLRD1Q13241 179 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 OR4C13Q8NGP0 309 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 Q8TCH9 128 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 INSIG2Q9Y5U4 225 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SRRM4A7MD48 611 aaKnown RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 LYZL6O75951 148 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 IFITM1P13164 125 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 TNFRSF1AP19438 455 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 C11orf53Q8IXP5 236 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 EXOC3-AS1Q8N2X6 119 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SLC25A39Q9BZJ4 359 aaPredicted RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 ARHGAP32A7KAX9 2087 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 C2orf16Q68DN1 1984 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 LINC00322Q6ZN03 302 aaPredicted RBP4.05□□□□□ -1.76
HERC1-201ENST00000443617 UFC1Q9Y3C8 167 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SMKR1H3BMG3 65 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 SMRP1Q8NCR6 262 aa4.05□□□□□ -1.76
HERC1-201ENST00000443617 EPOPA6NHQ4 379 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 Q86TA4 180 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 METRNQ9UJH8 293 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 PRSS29PA6NIE9 313 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 ARMS2P0C7Q2 107 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 SFTA2Q6UW10 78 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 AMN1Q8IY45 258 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 NDUFA4L2Q9NRX3 87 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 RASL11BQ9BPW5 248 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 PLNP26678 52 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 TMEM178AQ8NBL3 297 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 SHISA9B4DS77 424 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 LAGE3Q14657 143 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 MRPL51Q4U2R6 128 aaKnown RBP4.04□□□□□ -1.76
HERC1-201ENST00000443617 SCGB3A1Q96QR1 104 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 TMEM131Q92545 1883 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 TMEM213A2RRL7 107 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 PINLYPA6NC86 204 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 MORN5Q5VZ52 161 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 Q6ZUT4 128 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 OSR1Q8TAX0 266 aaPredicted RBP4.04□□□□□ -1.76
HERC1-201ENST00000443617 CCL13Q99616 98 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 ANKRD17O75179 2603 aaKnown RBP4.04□□□□□ -1.76
HERC1-201ENST00000443617 MAGEA5P43359 124 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 TAL2Q16559 108 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
HERC1-201ENST00000443617 AGFG2O95081 481 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 CCL4P13236 92 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 UBALD2Q8IYN6 164 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 Q1RN00 199 aa4.04□□□□□ -1.76
HERC1-201ENST00000443617 LAMTOR5O43504 91 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 IGKV1-16P04430 117 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 TMEM78Q5T7P6 136 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 SPANXA1Q9NS26 97 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 PGPEP1Q9NXJ5 209 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 IGKV1D-17A0A075B6S4 117 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 C19orf71A6NCJ1 209 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 ZNRF1Q8ND25 227 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 URB1-AS1Q96HZ7 61 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 TMEM30BQ3MIR4 351 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 THSD7BQ9C0I4 1608 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 LCNL1Q6ZST4 164 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 A0A1W2PQM1 296 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 EVI2AP22794 236 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 H7C1H1 209 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 PSG8Q9UQ74 426 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 OBSL1O75147 1896 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 WISP2O76076 250 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 MRPL14Q6P1L8 145 aaKnown RBP4.03□□□□□ -1.76
HERC1-201ENST00000443617 CEP350Q5VT06 3117 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 TRBV25-1A0A075B6N4 114 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 ZNF503-AS2A6NEH8 195 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 APELAP0DMC3 54 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 TMEM14CQ9P0S9 112 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 RNF7Q9UBF6 113 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 IGKV1OR2-108A0A075B7D4 117 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 ATP6V0E2Q8NHE4 81 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 JMJD1CQ15652 2540 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 VWC2LB2RUY7 222 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 SHANK2-AS3Q9BTD1 123 aa4.03□□□□□ -1.76
HERC1-201ENST00000443617 MYMXA0A1B0GTQ4 84 aa4.03□□□□□ -1.77
HERC1-201ENST00000443617 CXCL12P48061 93 aa4.03□□□□□ -1.77
HERC1-201ENST00000443617 RAXQ9Y2V3 346 aa4.03□□□□□ -1.77
HERC1-201ENST00000443617 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 M0R1B8 84 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 LTBRP36941 435 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 FOXE3Q13461 319 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 PATE2Q6UY27 113 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 A0A0C4DFX4 3053 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TRGV5A0A0B4J1U4 118 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 TRAV8-2A0A0B4J237 113 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 K7EMI3 77 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 SH2D1AO60880 128 aa4.02□□□□□ -1.77
HERC1-201ENST00000443617 HERVK_113P61574 105 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms