RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 MDFIC2A0A1B0GVS7 189 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 A8MUU9 505 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 APOC4-APOC2K7ER74 178 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 LYRM1O43325 122 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 TIMM17BO60830 172 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 APOC2P02655 101 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 IGLV7-43P04211 117 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 CTSDP07339 412 aaPredicted RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 FABP4P15090 132 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 RPL28P46779 137 aaKnown RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 PCBD1P61457 104 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 SUPT4H1P63272 117 aaKnown RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 ZNF117Q03924 483 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 FUT5Q11128 374 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 EBI3Q14213 229 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 LGALSLQ3ZCW2 172 aaPredicted RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 C9orf153Q5TBE3 101 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 PATE2Q6UY27 113 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 C10orf111Q8N326 155 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 TMEM105Q8N8V8 129 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 Q8N9L7 120 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 PLPP5Q8NEB5 264 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 MUC7Q8TAX7 377 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 FGF13Q92913 245 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 RAB37Q96AX2 223 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 CDK5RAP2Q96SN8 1893 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 SCN2AQ99250 2005 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 PKMYT1Q99640 499 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 LINC00467Q9BRT7 94 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 SEC11CQ9BY50 192 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 AGPAT4-IT1Q9H0P7 198 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 NHP2Q9NX24 153 aaKnown RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 LSM2Q9Y333 95 aaKnown RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 TIMM9Q9Y5J7 89 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 CHCHD2Q9Y6H1 151 aaPredicted RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 DSCAML1Q8TD84 2053 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 DENND4CQ5VZ89 1909 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 TICRRQ7Z2Z1 1910 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 RPRD2Q5VT52 1461 aaKnown RBP2.89□□□□□ -1.95
VPS50-206ENST00000443443 MYH11P35749 1972 aa2.89□□□□□ -1.95
VPS50-206ENST00000443443 NACAE9PAV3 2078 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 PLXND1Q9Y4D7 1925 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 TROQ12816 1431 aaPredicted RBP2.88□□□□□ -1.95
VPS50-206ENST00000443443 IGHV3-15A0A0B4J1V0 119 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 LOC107986453A0A1B0GWG9 222 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 TMEM235A6NFC5 223 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 ZNF861PO60384 105 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 OR1I1O60431 355 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 IL4P05112 153 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 SAA1P0DJI8 122 aaPredicted RBP2.88□□□□□ -1.95
VPS50-206ENST00000443443 COX6A1P12074 109 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 FUSP35637 526 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS50-206ENST00000443443 BLCAPP62952 87 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 ZNF660Q6AZW8 331 aaPredicted RBP2.88□□□□□ -1.95
VPS50-206ENST00000443443 FOXI2Q6ZQN5 318 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 Q6ZUT4 128 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 DYNAPQ8N1N2 210 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 C3orf56Q8N813 242 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 CHCHD1Q96BP2 118 aaKnown RBP2.88□□□□□ -1.95
VPS50-206ENST00000443443 MRPS24Q96EL2 167 aaKnown RBP2.88□□□□□ -1.95
VPS50-206ENST00000443443 C16orf95Q9H693 158 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 BCL2L10Q9HD36 194 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 ASF1BQ9NVP2 202 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 FKBP11Q9NYL4 201 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 HSPE1-MOB4S4R3N1 261 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 RIMBP3CA6NJZ7 1639 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 RIMBP3BA6NNM3 1639 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 RIMBP3Q9UFD9 1639 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 DOCK4Q8N1I0 1966 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 ECM29Q5VYK3 1845 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 NUP210LQ5VU65 1888 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 NLRC5Q86WI3 1866 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 ANKRD31Q8N7Z5 1873 aa2.88□□□□□ -1.95
VPS50-206ENST00000443443 GTF3C1Q12789 2109 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 RIC1Q4ADV7 1423 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 KIAA1671Q9BY89 1806 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 IGKV1D-37A0A075B6S9 117 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 C3orf85A0A1B0GTC6 90 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 OR51F1A6NGY5 319 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 H3BPC8 53 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 H3BQ85 93 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 KRTAP5-8O75690 187 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 IGHV3-53P01767 116 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 GZMBP10144 247 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 UBA52P62987 128 aaKnown RBP2.87□□□□□ -1.95
VPS50-206ENST00000443443 CIRBPQ14011 172 aaKnown RBP2.87□□□□□ -1.95
VPS50-206ENST00000443443 ZNF846Q147U1 533 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 OR5AS1Q8N127 324 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 AQP3Q92482 292 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 TAS2R4Q9NYW5 299 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 RPL26L1Q9UNX3 145 aaKnown RBP2.87□□□□□ -1.95
VPS50-206ENST00000443443 ZNF443Q9Y2A4 671 aaPredicted RBP2.87□□□□□ -1.95
VPS50-206ENST00000443443 TPRKBQ9Y3C4 175 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 AP4S1Q9Y587 144 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 SERP1Q9Y6X1 66 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 COL1A1P02452 1464 aaPredicted RBP2.87□□□□□ -1.95
VPS50-206ENST00000443443 MYH7P12883 1935 aa2.87□□□□□ -1.95
VPS50-206ENST00000443443 TCRBV3S1A0A5B6 114 aa2.86□□□□□ -1.95
VPS50-206ENST00000443443 ZNF736B4DX44 427 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms