RNA–Protein interactions for RNA: ENST00000440902.2

LYSMD1-202, Transcript of LysM domain containing 1, humanhuman

TSL 2 BASIC

Gene LYSMD1, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-202ENST00000440902 SHANK2-AS3Q9BTD1 123 aa5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 KRTAP1-5Q9BYS1 174 aa5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 Q9H8V8 135 aa5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 NOP10Q9NPE3 64 aaKnown RBP5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 CCDC59Q9P031 241 aaKnown RBP5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 STRAPQ9Y3F4 350 aaKnown RBP5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 TIMM8BQ9Y5J9 83 aaPredicted RBP5.6□□□□□ -1.51
LYSMD1-202ENST00000440902 TRAV26-1A0A087WT03 109 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 A0A0J9YY99 117 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 FABP12A6NFH5 140 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 HYPMO75409 117 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 SNRPCP09234 159 aaKnown RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 LINC00869P0C866 280 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 CDKN1BP46527 198 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 RRAS2P62070 204 aaPredicted RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 DLK1P80370 383 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 PPP1R1AQ13522 171 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 PSG3Q16557 428 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 TTC32Q5I0X7 151 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 ARL6IP6Q8N6S5 226 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 LRTM2Q8N967 370 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 DYNC2LI1Q8TCX1 351 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 TMEM263Q8WUH6 116 aaKnown RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 ANAPC16Q96DE5 110 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 GNPNAT1Q96EK6 184 aaPredicted RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 PARD6GQ9BYG4 376 aaPredicted RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 RBM38Q9H0Z9 239 aaKnown RBP5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 RYR1P21817 5038 aa5.59□□□□□ -1.51
LYSMD1-202ENST00000440902 DYNC1H1Q14204 4646 aaKnown RBP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 A0A087X0K7 114 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 FAM25EA8MYX2 175 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 SSSCA1O60232 199 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 CCNKO75909 580 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 SFT2D2O95562 160 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 ANXA7P20073 488 aaKnown RBP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 TNFSF8P32971 234 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 AP3S2P59780 193 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 KRTAP10-2P60368 255 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 POLR2GP62487 172 aaKnown RBP eCLIP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 ID3Q02535 119 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 KIR3DS1Q14943 382 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 PYDC2Q56P42 97 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 CCDC190Q86UF4 302 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 TOMM5Q8N4H5 51 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 OR10J6PQ8NGY7 276 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 MCFD2Q8NI22 146 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 RNASE8Q8TDE3 154 aaKnown RBP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 RAB2BQ8WUD1 216 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 TRIM63Q969Q1 353 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 RPUSD4Q96CM3 377 aaKnown RBP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 ARL6Q9H0F7 186 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 MRPL18Q9H0U6 180 aaKnown RBP5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 Q9H3A6 140 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 ZNF586Q9NXT0 402 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 PSENENQ9NZ42 101 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 ABCA13Q86UQ4 5058 aa5.58□□□□□ -1.52
LYSMD1-202ENST00000440902 DNAH11Q96DT5 4516 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 GAGE12BA1L429 117 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 PMS2P5A8MQ11 134 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 H3BTX0 84 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 H7BYZ3 331 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 J3KRW8 73 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 ZNF701M0R085 212 aaPredicted RBP5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 ADAP1O75689 374 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 GAGE7O76087 117 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 RLN2P04090 185 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 GAGE12FP0CL80 117 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 GAGE12GP0CL81 117 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 GAGE12IP0CL82 117 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 M6PRP20645 277 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 HOXA5P20719 270 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 PLP1P60201 277 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 ZNF493Q6ZR52 646 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 CCDC28AQ8IWP9 274 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 RXFP4Q8TDU9 374 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 SOSTQ9BQB4 213 aa5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 SLIRPQ9GZT3 109 aaKnown RBP5.57□□□□□ -1.52
LYSMD1-202ENST00000440902 SNURFLB1AK76 121 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 MRPS12O15235 138 aaKnown RBP5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 NOL3O60936 208 aaKnown RBP5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 SCGB1D2O95969 90 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 METTL15P1P0C7V9 234 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 SELENOTP62341 195 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 SLC38A11Q08AI6 406 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 ESRGQ1W209 222 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 GFI1BQ5VTD9 330 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 LCN15Q6UWW0 184 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 PATE2Q6UY27 113 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 S100A7AQ86SG5 101 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 C20orf144Q9BQM9 153 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 SLC25A21Q9BQT8 299 aaPredicted RBP5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 SLC50A1Q9BRV3 221 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 ARV1Q9H2C2 271 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 TMPRSS5Q9H3S3 457 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 ZNF331Q9NQX6 463 aaPredicted RBP5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 PTTG2Q9NZH5 202 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 MGAT4CQ9UBM8 478 aa5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 MRPS16Q9Y3D3 137 aaKnown RBP5.56□□□□□ -1.52
LYSMD1-202ENST00000440902 HSPG2P98160 4391 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms