RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 SLC25A2Q9BXI2 301 aa13.48□□□□□ -0.25
PTX4-202ENST00000440447 SH3BGRL3Q9H299 93 aa13.48□□□□□ -0.25
PTX4-202ENST00000440447 CYTL1Q9NRR1 136 aa13.48□□□□□ -0.25
PTX4-202ENST00000440447 A0A1W2PPV4 95 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 KANTRA0A1W2PQU2 76 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 H3BQ15 152 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 H3BTX0 84 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 MBP02144 154 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 C1QBP02746 253 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 HIST1H1EP10412 219 aaKnown RBP13.47□□□□□ -0.25
PTX4-202ENST00000440447 RAB2AP61019 212 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 OR10G4Q8NGN3 311 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 OR10G9Q8NGN4 311 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 OR10G7Q8NGN6 311 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 FAM167A-AS1Q96KT0 104 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 C20orf173Q96LM9 149 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 SPATA25Q9BR10 227 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 SLC50A1Q9BRV3 221 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 OR51M1Q9H341 326 aa13.47□□□□□ -0.25
PTX4-202ENST00000440447 UBE2CO00762 179 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 PYYP10082 97 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 TAS2R45P59539 299 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 EBLN2Q6P2I7 272 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 FAM122CQ6P4D5 195 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 FOXI2Q6ZQN5 318 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 TRPT1Q86TN4 253 aaKnown RBP13.46□□□□□ -0.25
PTX4-202ENST00000440447 RNF182Q8N6D2 247 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 PAXXQ9BUH6 204 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 CSTL1Q9H114 145 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 SAV1Q9H4B6 383 aaPredicted RBP13.46□□□□□ -0.25
PTX4-202ENST00000440447 ZNF331Q9NQX6 463 aaPredicted RBP13.46□□□□□ -0.25
PTX4-202ENST00000440447 ZNF586Q9NXT0 402 aa13.46□□□□□ -0.25
PTX4-202ENST00000440447 BCL2L11O43521 198 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 OR7C2O60412 319 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 PFDN1O60925 122 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 HLA-DRB4P13762 266 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 PSG3Q16557 428 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 KHDC3LQ587J8 217 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 TMUB2Q71RG4 321 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 SAT2Q96F10 170 aaPredicted RBP13.45□□□□□ -0.26
PTX4-202ENST00000440447 CLEC5AQ9NY25 188 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 HLA-DRB4X5D2U9 266 aa13.45□□□□□ -0.26
PTX4-202ENST00000440447 TRBV19A0A075B6N1 114 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 H3BMM0 161 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 SLC17A3O00476 420 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 ZNF253O75346 499 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 HLA-DMBP28068 263 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 DEFB1P60022 68 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 ZNF738Q8NE65 137 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 BLNKQ8WV28 456 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 RNF141Q8WVD5 230 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 HYLS1Q96M11 299 aa13.44□□□□□ -0.26
PTX4-202ENST00000440447 ZNF471Q9BX82 626 aaPredicted RBP13.44□□□□□ -0.26
PTX4-202ENST00000440447 NBEAP1P0C6P0 100 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 SPP1P10451 314 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 CDC34P49427 236 aaPredicted RBP13.43□□□□□ -0.26
PTX4-202ENST00000440447 PDE6HQ13956 83 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 TMEM41BQ5BJD5 291 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 GDF5OSQ5U4N7 250 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 MORN3Q6PF18 240 aaPredicted RBP13.43□□□□□ -0.26
PTX4-202ENST00000440447 U3KQK5 164 aa13.43□□□□□ -0.26
PTX4-202ENST00000440447 A0A0J9YX75 114 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 F6UB75 175 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 EIF3GO75821 320 aaKnown RBP eCLIP13.42□□□□□ -0.26
PTX4-202ENST00000440447 CA1P00915 261 aaPredicted RBP13.42□□□□□ -0.26
PTX4-202ENST00000440447 OR10J4P0C629 311 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 EIF5AP63241 154 aaKnown RBP13.42□□□□□ -0.26
PTX4-202ENST00000440447 PSG9Q00887 426 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 Q6ZWC4 215 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 RPP25LQ8N5L8 163 aaKnown RBP13.42□□□□□ -0.26
PTX4-202ENST00000440447 OR4B1Q8NGF8 309 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 FXYD5Q96DB9 178 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 RCHY1Q96PM5 261 aa13.42□□□□□ -0.26
PTX4-202ENST00000440447 DUSP14O95147 198 aaKnown RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 IGKV3-20P01619 116 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 NUTF2P61970 127 aaKnown RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 UBE2L3P68036 154 aaKnown RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 CD300CQ08708 224 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 LGALSLQ3ZCW2 172 aaPredicted RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 AKR1C8PQ5T2L2 129 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 PQLC2Q6ZP29 291 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 RPUSD4Q96CM3 377 aaKnown RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 ZNF503Q96F45 646 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 ACTR3CQ9C0K3 210 aaPredicted RBP13.41□□□□□ -0.26
PTX4-202ENST00000440447 RETNQ9HD89 108 aa13.41□□□□□ -0.26
PTX4-202ENST00000440447 HMGB3O15347 200 aaKnown RBP13.4□□□□□ -0.26
PTX4-202ENST00000440447 NDUFB4O95168 129 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 DEFB135Q30KP9 77 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 ZFP69Q49AA0 526 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 RAB24Q969Q5 203 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 CLUHP3Q96NS8 147 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 AAMDCQ9H7C9 122 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 TP53TG1Q9Y2A0 90 aa13.4□□□□□ -0.26
PTX4-202ENST00000440447 TGP01266 2768 aa13.39□□□□□ -0.27
PTX4-202ENST00000440447 HUWE1Q7Z6Z7 4374 aaKnown RBP13.39□□□□□ -0.27
PTX4-202ENST00000440447 SPRY2O43597 315 aa13.39□□□□□ -0.27
PTX4-202ENST00000440447 OR8A1Q8NGG7 326 aa13.39□□□□□ -0.27
PTX4-202ENST00000440447 OVOL2Q9BRP0 275 aa13.39□□□□□ -0.27
PTX4-202ENST00000440447 PRELID1Q9Y255 219 aa13.39□□□□□ -0.27
PTX4-202ENST00000440447 ZNF705FA8MVS1 300 aaPredicted RBP13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms