RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 PPIAL4EA0A075B759 164 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 OVOL3O00110 214 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 PPIAL4FP0DN26 164 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 CR1LQ2VPA4 569 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 LYZL1Q6UWQ5 148 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 ABHD17AQ96GS6 310 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 PRELID3AQ96N28 172 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 HAX1O00165 279 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 FCER1GP30273 86 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 INSL3P51460 131 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 GTSCR1Q86UQ5 136 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 BOD1L2Q8IYS8 172 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 ARPC1AQ92747 370 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 MSRB1Q9NZV6 116 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
ACTN1-204ENST00000438964 FCN3O75636 299 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 ATP5G2Q06055 141 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 ETDBQ3ZM63 59 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 MBNL2Q5VZF2 373 aaKnown RBP10.62□□□□□ -0.71
ACTN1-204ENST00000438964 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-204ENST00000438964 TMEM133Q9H2Q1 129 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 AKAP6Q13023 2319 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 NPYP01303 97 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 GATA1P15976 413 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-204ENST00000438964 HSD52Q0P140 79 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 Q8TAT8 98 aa10.62□□□□□ -0.71
ACTN1-204ENST00000438964 H3BMG7 143 aa10.61□□□□□ -0.71
ACTN1-204ENST00000438964 LHBP01229 141 aa10.61□□□□□ -0.71
ACTN1-204ENST00000438964 SUB1P53999 127 aaKnown RBP eCLIP10.61□□□□□ -0.71
ACTN1-204ENST00000438964 RIGQ13278 110 aa10.61□□□□□ -0.71
ACTN1-204ENST00000438964 KLF17Q5JT82 389 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-204ENST00000438964 OSR1Q8TAX0 266 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-204ENST00000438964 IFI27L1Q96BM0 104 aa10.61□□□□□ -0.71
ACTN1-204ENST00000438964 HIGD1AQ9Y241 93 aa10.61□□□□□ -0.71
ACTN1-204ENST00000438964 IGHV3-35A0A0C4DH35 117 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 IGHV1-46P01743 117 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 TMEM164Q5U3C3 297 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 OR4C13Q8NGP0 309 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 SLC25A39Q9BZJ4 359 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-204ENST00000438964 M0R296 226 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 APOBEC3AP31941 199 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-204ENST00000438964 LYPD2Q6UXB3 125 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 CCL17Q92583 94 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 ZNF492Q9P255 531 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 ANKRD11Q6UB99 2663 aaPredicted RBP10.6□□□□□ -0.71
ACTN1-204ENST00000438964 IGLV2-23P01705 113 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 TMEM200BQ69YZ2 307 aa10.6□□□□□ -0.71
ACTN1-204ENST00000438964 CHTOPQ9Y3Y2 248 aaKnown RBP10.6□□□□□ -0.71
ACTN1-204ENST00000438964 PRSS1P07477 247 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 SMIM13P0DJ93 91 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 CKS2P33552 79 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 TWIST1Q15672 202 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 MRPL51Q4U2R6 128 aaKnown RBP10.59□□□□□ -0.71
ACTN1-204ENST00000438964 ZNF833PQ6ZTB9 187 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 THAP8Q8NA92 274 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 SPRY4Q9C004 299 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 ZNF71Q9NQZ8 489 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-204ENST00000438964 PSG8Q9UQ74 426 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 SOX21Q9Y651 276 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-204ENST00000438964 IGKV2-40A0A087WW87 121 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-204ENST00000438964 C16orf97H3BN30 126 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 NDUFS7O75251 213 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 IGKV2D-40P01614 121 aaPredicted RBP10.59□□□□□ -0.71
ACTN1-204ENST00000438964 IGLV1-44P01699 117 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 CT83Q5H943 113 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 FDCSPQ8NFU4 85 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 PROCRQ9UNN8 238 aa10.59□□□□□ -0.71
ACTN1-204ENST00000438964 CUBNO60494 3623 aa10.58□□□□□ -0.71
ACTN1-204ENST00000438964 NPIPB6E9PJ23 425 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 STXBP6Q8NFX7 210 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 TMEM167AQ8TBQ9 72 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 GFRA4Q9GZZ7 299 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 ARRDC1-AS1Q9H2J1 176 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 SLC25A15Q9Y619 301 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 SPTA1P02549 2419 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 IGHV3-23P01764 117 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 TDHQ8IZJ6 230 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 C8orf46Q8TAG6 207 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 DEFB104AQ8WTQ1 72 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 CELSR1Q9NYQ6 3014 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 NPIPB5A8MRT5 1133 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 FAM169BQ8N8A8 192 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 TMEM178AQ8NBL3 297 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 FBXL15Q9H469 300 aa10.58□□□□□ -0.72
ACTN1-204ENST00000438964 AKAP13Q12802 2813 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 HBDP02042 147 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 FAM27E3Q08E93 113 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 SIGMAR1Q99720 223 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 CHAC1Q9BUX1 264 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 TMEM160Q9NX00 188 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 RIF1Q5UIP0 2472 aaKnown RBP10.57□□□□□ -0.72
ACTN1-204ENST00000438964 PRSS47A8MTI9 375 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 LAMTOR5O43504 91 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 HLA-DMBP28068 263 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 CEACAM3P40198 252 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 MRGPRG-AS1Q2M3A8 158 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 ORMDL3Q8N138 153 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 OTORQ9NRC9 128 aa10.57□□□□□ -0.72
ACTN1-204ENST00000438964 TTC28Q96AY4 2481 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms