RNA–Protein interactions for RNA: ENST00000438581.6

TMEM39A-202, Transcript of transmembrane protein 39A, humanhuman

TSL 1 (best)

Gene TMEM39A, Length 4,393 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-202ENST00000438581 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 PYYP10082 97 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNF506Q5JVG8 444 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 TEX36Q5VZQ5 186 aa6.58□□□□□ -1.36
TMEM39A-202ENST00000438581 TRBV24-1A0A075B6N3 115 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 SCO2A0A1W2PP80 73 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 A0A1W2PRX2 142 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 SRP19P09132 144 aaKnown RBP6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 TRGC1P0CF51 173 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CX3CL1P78423 397 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNF343Q6P1L6 599 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 TMEM167AQ8TBQ9 72 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 PAM16Q9Y3D7 125 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 NPFFO15130 113 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 DIAPH2-AS1Q14236 149 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CENPWQ5EE01 88 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 RUSC1-AS1Q66K80 236 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 TMEM14EPQ6UXP3 125 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CENPVL3A0A0U1RRI6 287 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 A8MWL6 223 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 TMEM250H0YL14 139 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 C15orf65H3BRN8 121 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 IGKV1-39P01597 117 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 IGKV1D-39P04432 117 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 C22orf34Q6ZV56 151 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNF257Q9Y2Q1 563 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 TRAV5A0A0B4J249 113 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 M0R1W7 72 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CNTFRP26992 372 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 KRTAP27-1Q3LI81 207 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 OR10J6PQ8NGY7 276 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 GGTLC1Q9BX51 225 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CTSZQ9UBR2 303 aa6.57□□□□□ -1.36
TMEM39A-202ENST00000438581 CHD3Q12873 2000 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 MORN3Q6PF18 240 aaPredicted RBP6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 APRG1Q8IVJ8 170 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 RPP25LQ8N5L8 163 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 ST6GALNAC6Q969X2 333 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 IGHV3OR16-12A0A075B7B8 117 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 A0A0G2JLM5 398 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 FAM90A9PA6NNJ1 464 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 FOXI3A8MTJ6 420 aaPredicted RBP6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 PSMG4Q5JS54 123 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 SPANXN1Q5VSR9 72 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 EBLN2Q6P2I7 272 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 IGFBPL1Q8WX77 278 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 NPFFR1Q9GZQ6 430 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 DSCR9P59020 149 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 RIGQ13278 110 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 KIAA1644Q3SXP7 199 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 TTC32Q5I0X7 151 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 MINOS1Q5TGZ0 78 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 IL17RELQ6ZVW7 336 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNF329Q86UD4 541 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 COPS9Q8WXC6 57 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 GTSF1LQ9H1H1 148 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 MINOS1-NBL1R4GNA1 71 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 ARL2-SNX15V9GYD0 113 aa6.56□□□□□ -1.36
TMEM39A-202ENST00000438581 TRANK1O15050 2925 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNF462Q96JM2 2506 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 TCRBV4S1A1TA0A5B7 111 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 SPATA31B1PQ5VZV4 182 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 SRSF8Q9BRL6 282 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 PRORYQ9H606 182 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 POLR3KQ9Y2Y1 108 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 ARHGAP32A7KAX9 2087 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 C15orf32Q32M92 178 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 PGLYRP4Q96LB8 373 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 PRO0628Q9UI54 55 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 TEX22C9J3V5 150 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 ADCYAP1P18509 176 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 C2orf83Q53S99 150 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 CD164L2Q6UWJ8 174 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 Q6ZSR3 168 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 ZNRF2Q8NHG8 242 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 KIR2DL5BQ8NHK3 375 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 RCHY1Q96PM5 261 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 PRSS22Q9GZN4 317 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 BRI3O95415 125 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 MGPP08493 103 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 GNG5P63218 68 aa6.55□□□□□ -1.36
TMEM39A-202ENST00000438581 MUC21A0A0G2JKD1 596 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MUC21A0A140T8X8 626 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MSMBP08118 114 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MUC21Q5SSG8 566 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 MOB4Q9Y3A3 225 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 POLQO75417 2590 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 TRIOO75962 3097 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 EML5Q05BV3 1969 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 PKD1L2Q7Z442 2459 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 TRAV41A0A0B4J266 112 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 A0A0U1RRA0 63 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 A0A1W2PPI3 338 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 C7orf71A4D174 169 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 J3QKU1 62 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 HLA-DRB1P01911 266 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 LYRM7Q5U5X0 104 aa6.54□□□□□ -1.36
TMEM39A-202ENST00000438581 NUP210LQ5VU65 1888 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms