RNA–Protein interactions for RNA: ENST00000438510.5

HLA-DMB-259, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 663 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-259ENST00000438510 SORL1Q92673 2214 aa7.92□□□□□ -1.14
HLA-DMB-259ENST00000438510 KRBOX1C9JBD0 128 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 K7EQG2 157 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 ISLRO14498 428 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 CXorf1O96002 111 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 STAG3L2P0CL84 134 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 STAG3L3P0CL85 134 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 IGLC2P0DOY2 106 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 HIST1H1EP10412 219 aaKnown RBP7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 PSMB3P49720 205 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 KRTAP10-11P60412 298 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 SNRPD3P62318 126 aaKnown RBP7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 UBE2L3P68036 154 aaKnown RBP7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 PDE6HQ13956 83 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 WFDC3Q8IUB2 231 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 FAM213BQ8TBF2 198 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 C16orf92Q96LL3 132 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 FAM110AQ9BQ89 295 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 SLC50A1Q9BRV3 221 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 SMAD5-AS1Q9Y6J3 95 aa7.91□□□□□ -1.14
HLA-DMB-259ENST00000438510 NOTCH3Q9UM47 2321 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 MAP1LC3B2A6NCE7 125 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 LCE2BO14633 110 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 HMGB3O15347 200 aaKnown RBP7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 ZNF253O75346 499 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 OR10J4P0C629 311 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 ARL14EPLP0DKL9 152 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 PYYP10082 97 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 SULT1A2P50226 295 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 CD81P60033 236 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 RNF141Q8WVD5 230 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 MAP1LC3BQ9GZQ8 125 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 CLEC5AQ9NY25 188 aa7.9□□□□□ -1.14
HLA-DMB-259ENST00000438510 TRBV19A0A075B6N1 114 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 OR11H12B2RN74 326 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 H3BQ15 152 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 TEX46H3BTG2 121 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 SOCS3O14543 225 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 NMBP08949 121 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 NBEAP1P0C6P0 100 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF688P0C7X2 276 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 PSG9Q00887 426 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF726P1Q15940 193 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 UQCC3Q6UW78 93 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 ALKAL2Q6UX46 152 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 IQCF2Q8IXL9 164 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 FXYD5Q96DB9 178 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 SAT2Q96F10 170 aaPredicted RBP7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 PRR25Q96S07 402 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 MAP6D1Q9H9H5 199 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 TMEM167BQ9NRX6 74 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF586Q9NXT0 402 aa7.89□□□□□ -1.15
HLA-DMB-259ENST00000438510 MGAM2Q2M2H8 2515 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 EIF3GO75821 320 aaKnown RBP eCLIP7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 CD7P09564 240 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 H2AFB1P0C5Y9 115 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 GCHFRP30047 84 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 FHITP49789 147 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 ODF3L2Q3SX64 289 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 PSMG4Q5JS54 123 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 SSX7Q7RTT5 188 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 CCDC28AQ8IWP9 274 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 BLNKQ8WV28 456 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF503Q96F45 646 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 C17orf77Q96MU5 243 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 AAMDCQ9H7C9 122 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF331Q9NQX6 463 aaPredicted RBP7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 DNAH3Q8TD57 4116 aa7.88□□□□□ -1.15
HLA-DMB-259ENST00000438510 RAB19A4D1S5 217 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF705EA8MWA4 302 aaPredicted RBP7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 H3BTX0 84 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 SLC17A3O00476 420 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 HBE1P02100 147 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 SNRPCP09234 159 aaKnown RBP7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 DEFB131AP59861 70 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 FAM74A1Q5RGS3 127 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 COMMD7Q86VX2 200 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 LYPD1Q8N2G4 141 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 FAM24BQ8N5W8 94 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 SFT2D1Q8WV19 159 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 MBD3L1Q8WWY6 194 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 LINC00052Q96N35 136 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 AURKAIP1Q9NWT8 199 aaPredicted RBP7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 PRELID1Q9Y255 219 aa7.87□□□□□ -1.15
HLA-DMB-259ENST00000438510 TRAV8-2A0A0B4J237 113 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 PPT1P50897 306 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 FGF8P55075 233 aaPredicted RBP7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 BLOC1S1P78537 153 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 Q8N1Y9 231 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 ZNF738Q8NE65 137 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 SUN5Q8TC36 379 aa7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 MRPL53Q96EL3 112 aaKnown RBP7.86□□□□□ -1.15
HLA-DMB-259ENST00000438510 TRAV1-1A0A0B4J248 108 aa7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 NDUFB4O95168 129 aa7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 RANP62826 216 aaKnown RBP7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 PSG3Q16557 428 aa7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 EBLN2Q6P2I7 272 aa7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 FOXI2Q6ZQN5 318 aa7.85□□□□□ -1.15
HLA-DMB-259ENST00000438510 RNF182Q8N6D2 247 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms