RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 IGHV1OR15-1A0A075B7D0 117 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 PGLYRP1O75594 196 aaPredicted RBP6.66□□□□□ -1.34
RTN4-211ENST00000438462 HTR2BP41595 481 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 ZNF90Q03938 601 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 TPRXLQ17RH7 258 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 C2orf76Q3KRA6 126 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 OR10P1Q8NGE3 313 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 ZNF431Q8TF32 576 aaPredicted RBP6.66□□□□□ -1.34
RTN4-211ENST00000438462 NUDCD2Q8WVJ2 157 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 NRG4Q8WWG1 115 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 MRGPRFQ96AM1 343 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 SLC25A38Q96DW6 304 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 C1orf43Q9BWL3 253 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 GTSF1LQ9H1H1 148 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 MRPS18AQ9NVS2 196 aaKnown RBP6.66□□□□□ -1.34
RTN4-211ENST00000438462 RAB22AQ9UL26 194 aa6.66□□□□□ -1.34
RTN4-211ENST00000438462 NEBP20929 6669 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 LINC00854A0A1B0GVQ3 168 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 ERICH4A6NGS2 130 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 IGKV1-39P01597 117 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 IGKV1D-39P04432 117 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 KRTAP19-1Q8IUB9 90 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 ENY2Q9NPA8 101 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 RAB21Q9UL25 225 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 URGCP-MRPS24S4R325 110 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 TMEM56-RWDD3S4R434 201 aa6.65□□□□□ -1.34
RTN4-211ENST00000438462 IGLV1-50A0A075B6I6 118 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 FABP12A6NFH5 140 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 OR10J4P0C629 311 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 MAJINQ3KP22 176 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 KRTAP6-3Q3LI67 103 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 STEAP1BQ6NZ63 245 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 SPATA24Q86W54 205 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 STPG4Q8N801 248 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 TMEM75Q8N9X5 138 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 OR51M1Q9H341 326 aa6.64□□□□□ -1.35
RTN4-211ENST00000438462 IGHV3-16A0A0C4DH30 117 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 MYL12AP19105 171 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 LEPP41159 167 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 RFX2P48378 723 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 FAM162BQ5T6X4 162 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 NIT1Q86X76 327 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 ZNF485Q8NCK3 441 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 RNASEH2CQ8TDP1 164 aaKnown RBP6.63□□□□□ -1.35
RTN4-211ENST00000438462 CENPNQ96H22 339 aaPredicted RBP6.63□□□□□ -1.35
RTN4-211ENST00000438462 PDCD10Q9BUL8 212 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 TMEM222Q9H0R3 208 aa6.63□□□□□ -1.35
RTN4-211ENST00000438462 AK6Q9Y3D8 172 aaKnown RBP6.63□□□□□ -1.35
RTN4-211ENST00000438462 IGKV1D-37A0A075B6S9 117 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 ZFP92A6NM28 416 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 SEC11BP0C7V7 166 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 RPS25P62851 125 aaKnown RBP6.62□□□□□ -1.35
RTN4-211ENST00000438462 ETFRF1Q6IPR1 90 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 OR4D5Q8NGN0 318 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 BORCS5Q969J3 196 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 GPR82Q96P67 336 aa6.62□□□□□ -1.35
RTN4-211ENST00000438462 TRAV1-1A0A0B4J248 108 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 TRAV4A0A0B4J268 109 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 IGKV2-24A0A0C4DH68 120 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 C7orf71A4D174 169 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 CT45A10P0DMU9 189 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 HERV-K104P61576 105 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 POLR2GP62487 172 aaKnown RBP eCLIP6.61□□□□□ -1.35
RTN4-211ENST00000438462 BTN1A1Q13410 526 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 C4orf46Q504U0 113 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 ARPC5LQ9BPX5 153 aa6.61□□□□□ -1.35
RTN4-211ENST00000438462 CRYM-AS1A6NIL9 109 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 SNRPGP15A8MWD9 76 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 HMGB1P1B2RPK0 211 aaPredicted RBP6.6□□□□□ -1.35
RTN4-211ENST00000438462 PRAC2D3DTV9 90 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 SSX5O60225 188 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 TCRBP04435 133 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 CD1AP06126 327 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 UBE2D1P51668 147 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 TSPAN5P62079 268 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 KRTAP19-2Q3LHN2 52 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 CDNFQ49AH0 187 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 C2orf83Q53S99 150 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 OR4C5Q8NGB2 326 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 RETNLBQ9BQ08 111 aa6.6□□□□□ -1.35
RTN4-211ENST00000438462 SLC25A5P05141 298 aaKnown RBP6.59□□□□□ -1.35
RTN4-211ENST00000438462 GNG2P59768 71 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 ARL6IP1Q15041 203 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 BPIFCQ8NFQ6 507 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 BEST4Q8NFU0 473 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 LRRC20Q8TCA0 184 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 TMEM170AQ8WVE7 144 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 ODF3Q96PU9 254 aa6.59□□□□□ -1.35
RTN4-211ENST00000438462 DIMT1Q9UNQ2 313 aaKnown RBP6.59□□□□□ -1.35
RTN4-211ENST00000438462 RRP15Q9Y3B9 282 aaKnown RBP6.59□□□□□ -1.35
RTN4-211ENST00000438462 TCRBV3S1A0A5B6 114 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 RGS13O14921 159 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 UCHL1P09936 223 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 HLA-DMAP28067 261 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 Q0VG73 95 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 KLF9Q13886 244 aaPredicted RBP6.58□□□□□ -1.36
RTN4-211ENST00000438462 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 SLC25A29Q8N8R3 303 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 OR52I2Q8NH67 350 aa6.58□□□□□ -1.36
RTN4-211ENST00000438462 RHOXF1Q8NHV9 184 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms