RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 DIAPH2-AS1Q14236 149 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 SPRNQ5BIV9 151 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 AMN1Q8IY45 258 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 SRSF8Q9BRL6 282 aaKnown RBP5.37□□□□□ -1.55
CSDE1-205ENST00000438362 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.37□□□□□ -1.55
CSDE1-205ENST00000438362 CD5LO43866 347 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 SH2D1AO60880 128 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 DPM2O94777 84 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 SCGB3A1Q96QR1 104 aa5.37□□□□□ -1.55
CSDE1-205ENST00000438362 NOTCH3Q9UM47 2321 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 E7EQL1 145 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 EVI2AP22794 236 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 SSBP2P81877 361 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-205ENST00000438362 PDE6HQ13956 83 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 DAZAP2Q15038 168 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-205ENST00000438362 TRBV19A0A075B6N1 114 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 IGHV1-24A0A0C4DH33 117 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 A0A1W2PNU3 283 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-205ENST00000438362 HTN1P15515 57 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 IFI27P40305 119 aaPredicted RBP5.36□□□□□ -1.55
CSDE1-205ENST00000438362 ASIPP42127 132 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 FXYD7P58549 80 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 DGAT2L7PQ6IED9 249 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 IGFL3Q6UXB1 125 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 Q8TAT8 98 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 KIR2DL4Q99706 377 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 NHP2Q9NX24 153 aaKnown RBP5.36□□□□□ -1.55
CSDE1-205ENST00000438362 IGKV1OR2-108A0A075B7D4 117 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 H3BVH4 76 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 PPP1R17O96001 155 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 SFTPCP11686 197 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 KLRD1Q13241 179 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 TMEM75Q8N9X5 138 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 DKK4Q9UBT3 224 aa5.36□□□□□ -1.55
CSDE1-205ENST00000438362 ARFGEF3Q5TH69 2177 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 IGKCP01834 107 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 FRMD6-AS1P0C7T7 363 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 ESDP10768 282 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 COL8A2P25067 703 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 CR1LQ2VPA4 569 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 LINC01559Q495D7 138 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 MORN5Q5VZ52 161 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 OR5A1Q8NGJ0 315 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 TMEM14CQ9P0S9 112 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 IGHV3OR16-10A0A075B7F0 116 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 NDUFA3O95167 84 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 IGLC1P0CG04 106 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 KLRB1Q12918 225 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 KLF5Q13887 457 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-205ENST00000438362 LY6EQ16553 131 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 C15orf32Q32M92 178 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 MAJINQ3KP22 176 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 FAM106AQ4KMX7 169 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 EBLN2Q6P2I7 272 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 FAM159AQ6UWV7 190 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 FAM167A-AS1Q96KT0 104 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 NAA38Q9BRA0 125 aaKnown RBP5.35□□□□□ -1.55
CSDE1-205ENST00000438362 ZFHX2Q9C0A1 2572 aaPredicted RBP5.35□□□□□ -1.55
CSDE1-205ENST00000438362 IGLC7A0M8Q6 106 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 OOSP1A8MZH6 123 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
CSDE1-205ENST00000438362 CLEC2AQ6UVW9 174 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 IGFL2Q6UWQ7 119 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 VMO1Q7Z5L0 202 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 SYT8Q8NBV8 401 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 KRTAP3-2Q9BYR7 98 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 SMPXQ9UHP9 88 aa5.35□□□□□ -1.55
CSDE1-205ENST00000438362 BPTFQ12830 3046 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 A0A0G2JLM5 398 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 SMKR1H3BMG3 65 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 THBDP07204 575 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 RPL13AP40429 203 aaKnown RBP5.34□□□□□ -1.55
CSDE1-205ENST00000438362 EIF4EBP1Q13541 118 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-205ENST00000438362 IGF2BP2-AS1Q96M15 143 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 RAXQ9Y2V3 346 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 ANKHD1Q8IWZ3 2542 aaKnown RBP5.34□□□□□ -1.55
CSDE1-205ENST00000438362 TMEM213A2RRL7 107 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 WT1P19544 449 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-205ENST00000438362 FAM104BQ5XKR9 115 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 PATE2Q6UY27 113 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 DPF1Q92782 380 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 MEGF9Q9H1U4 602 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 M0R1W7 72 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 LTAP01374 205 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 MSMPQ1L6U9 139 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 FAM74A4Q5TZK3 123 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 IGFL4Q6B9Z1 124 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 BCL6BQ8N143 479 aaPredicted RBP5.34□□□□□ -1.55
CSDE1-205ENST00000438362 KAAG1Q9UBP8 84 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 SELENOKQ9Y6D0 94 aa5.34□□□□□ -1.55
CSDE1-205ENST00000438362 CPAMD8Q8IZJ3 1885 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 GAGE12BA1L429 117 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 LGALS3P17931 250 aaKnown RBP5.34□□□□□ -1.56
CSDE1-205ENST00000438362 TMEM170BQ5T4T1 132 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 SAMD5Q5TGI4 173 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 MINOS1Q5TGZ0 78 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 ZNF562Q6V9R5 426 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 C8orf31Q8N9H6 132 aa5.34□□□□□ -1.56
CSDE1-205ENST00000438362 MRPL16Q9NX20 251 aaKnown RBP5.34□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms