RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 ZNF491Q8N8L2 437 aa13.23□□□□□ -0.29
TTC3-209ENST00000438055 ARPC1AQ92747 370 aa13.23□□□□□ -0.29
TTC3-209ENST00000438055 SMIM12Q96EX1 92 aa13.23□□□□□ -0.29
TTC3-209ENST00000438055 IGHV3OR16-13A0A075B7E8 117 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 LOC102724200A0A096LPH7 203 aaPredicted RBP13.22□□□□□ -0.29
TTC3-209ENST00000438055 IGHV3-74A0A0B4J1X5 117 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 hDV102S1A0JD36 115 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 C19orf71A6NCJ1 209 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 TCF21O43680 179 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 C5orf64Q2M2E5 130 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 PVRIGQ6DKI7 326 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 MAP1LC3CQ9BXW4 147 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 C21orf62Q9NYP8 219 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 TSPOP30536 169 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 KLF5Q13887 457 aaPredicted RBP13.22□□□□□ -0.29
TTC3-209ENST00000438055 Q6ZVH6 145 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 PRSS22Q9GZN4 317 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.22□□□□□ -0.292e-6■■■■■ 36.1
TTC3-209ENST00000438055 IGHV1-24A0A0C4DH33 117 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 APOHP02749 345 aaPredicted RBP13.22□□□□□ -0.29
TTC3-209ENST00000438055 TMEM191AQ9H0A3 160 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 THYN1Q9P016 225 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 TP73-AS1Q9UF72 201 aa13.22□□□□□ -0.29
TTC3-209ENST00000438055 FOSL1P15407 271 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 CTRLP40313 264 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 CT83Q5H943 113 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 DMRTA1Q5VZB9 504 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 C8orf49Q96NF6 230 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 RAXQ9Y2V3 346 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 IGKV2-40A0A087WW87 121 aaPredicted RBP13.21□□□□□ -0.29
TTC3-209ENST00000438055 IGKV2D-40P01614 121 aaPredicted RBP13.21□□□□□ -0.29
TTC3-209ENST00000438055 TMEM11P17152 192 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 NBL1P41271 181 aa13.21□□□□□ -0.29
TTC3-209ENST00000438055 ERASQ7Z444 233 aa13.21□□□□□ -0.3
TTC3-209ENST00000438055 RNF5Q99942 180 aa13.21□□□□□ -0.3
TTC3-209ENST00000438055 TMEM14CQ9P0S9 112 aa13.21□□□□□ -0.3
TTC3-209ENST00000438055 TMEM189A5PLL7 270 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 CDSNQ15517 529 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 UNQ5815/PRO19632Q6UWF5 114 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 AP5S1Q9NUS5 200 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 OR5AL1P0C617 328 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 Q8TAT8 98 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 ZFP30Q9Y2G7 519 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 IGHV3-66A0A0C4DH42 116 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 H3BRN7 92 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 PSG3Q16557 428 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 OR8A1Q8NGG7 326 aa13.2□□□□□ -0.3
TTC3-209ENST00000438055 C2orf70A6NJV1 201 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 ZNF785A8K8V0 405 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 SYS1-DBNDD2H3BUS1 97 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 RELQ04864 619 aaPredicted RBP13.19□□□□□ -0.3
TTC3-209ENST00000438055 SIGLEC15Q6ZMC9 328 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 NDUFS7O75251 213 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 GFRA4Q9GZZ7 299 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 FXYD7P58549 80 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 CCDC144NLQ6NUI1 221 aa13.19□□□□□ -0.3
TTC3-209ENST00000438055 TRAV30A0A087WSZ9 112 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 IGHV3-49A0A0A0MS15 119 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 ORM1P02763 201 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 VMO1Q7Z5L0 202 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 SNAI2O43623 268 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 NDUFB8O95169 186 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 PTTG1IPP53801 180 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 CHCHD1Q96BP2 118 aaKnown RBP13.18□□□□□ -0.3
TTC3-209ENST00000438055 URB1-AS1Q96HZ7 61 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 ZNF414Q96IQ9 312 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 SPATA12Q7Z6I5 190 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 UBTD1Q9HAC8 227 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 HSPB8Q9UJY1 196 aa13.18□□□□□ -0.3
TTC3-209ENST00000438055 HIVEP3Q5T1R4 2406 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 IGLV2-11P01706 119 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 PRTN3P24158 256 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 GPR183P32249 361 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 TMEM213A2RRL7 107 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 NPIPB5A8MRT5 1133 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 RPL7P18124 248 aaKnown RBP13.17□□□□□ -0.3
TTC3-209ENST00000438055 NDPQ00604 133 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 FBLN7Q53RD9 439 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 LYZL1Q6UWQ5 148 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 MRPL52Q86TS9 123 aaKnown RBP13.17□□□□□ -0.3
TTC3-209ENST00000438055 ZZEF1O43149 2961 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 LY6LH3BQJ8 138 aa13.17□□□□□ -0.3
TTC3-209ENST00000438055 TWIST1Q15672 202 aa13.16□□□□□ -0.3
TTC3-209ENST00000438055 VAMP3Q15836 100 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 TMEM75Q8N9X5 138 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 RABAC1Q9UI14 185 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 FAM231BA6NCW3 169 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 HAX1O00165 279 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 HLA-DMBP28068 263 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
TTC3-209ENST00000438055 NUDT3O95989 172 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 SLC25A34Q6PIV7 304 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 AMN1Q8IY45 258 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 DYNAPQ8N1N2 210 aa13.15□□□□□ -0.3
TTC3-209ENST00000438055 D6R8Y8 96 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 OR11H6Q8NGC7 330 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 FANCD2OSQ96PS1 177 aa13.14□□□□□ -0.31
TTC3-209ENST00000438055 SRSF8Q9BRL6 282 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms