RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 HIST1H2BAQ96A08 127 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 GRAMD2BQ96HH9 432 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 DAZ1Q9NQZ3 744 aaKnown RBP10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 EPDR1Q9UM22 224 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 UFC1Q9Y3C8 167 aa10.37□□□□□ -0.75
HLA-DPA1-243ENST00000437811 A0A1W2PS18 150 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C7orf77A4D0Y5 90 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 CYSRT1A8MQ03 144 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C9JCJ5 164 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RPL35P42766 123 aaKnown RBP10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RPL23P62829 140 aaKnown RBP10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 GNG5P63218 68 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 PSG9Q00887 426 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TM4SF20Q53R12 229 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 EXOC3-AS1Q8N2X6 119 aa10.36□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TRBV20OR9-2A0A075B6H5 130 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 HELTA6NFD8 242 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ZNF785A8K8V0 405 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 A8MWP6 167 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 LGALS9O00182 355 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 CD28P10747 220 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 HOXD3P31249 432 aaPredicted RBP10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 CNN1P51911 297 aaKnown RBP10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ADIRFQ15847 76 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 C1QL4Q86Z23 238 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 KLHL30-AS1Q8NEE0 82 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ATG101Q9BSB4 218 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RPS10P5Q9NQ39 176 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SMPXQ9UHP9 88 aa10.35□□□□□ -0.75
HLA-DPA1-243ENST00000437811 B4DEV8 164 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 LINC01619G3V211 115 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TCRAP04437 139 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 MEOX2P50222 304 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TAS2R60P59551 318 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 BTN1A1Q13410 526 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 DEFB136Q30KP8 78 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 CMTM2Q8TAZ6 248 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SLC50A1Q9BRV3 221 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 AAMDCQ9H7C9 122 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 ZNF331Q9NQX6 463 aaPredicted RBP10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RPH3ALQ9UNE2 315 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 RNF114Q9Y508 228 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 LY96Q9Y6Y9 160 aa10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 SETXQ7Z333 2677 aaKnown RBP10.34□□□□□ -0.75
HLA-DPA1-243ENST00000437811 TMEM213A2RRL7 107 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 DNASE2O00115 360 aaPredicted RBP10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CHEK1O14757 476 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SYNJ2BPP57105 145 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 PROK1P58294 105 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CENPWQ5EE01 88 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 LINC01551Q86U37 167 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 OR1N2Q8NGR9 330 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 DPF1Q92782 380 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 IGF2BP2-AS1Q96M15 143 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
HLA-DPA1-243ENST00000437811 A0A087WWC5 75 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 PGPEP1LA6NFU8 196 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 S100A9P06702 114 aaKnown RBP10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 EDN2P20800 178 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 BMI1P35226 326 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 GNG4P50150 75 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SLURP1P55000 103 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 KLF5Q13887 457 aaPredicted RBP10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TMEM183BQ1AE95 376 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CBLN2Q8IUK8 224 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 ARL6IP6Q8N6S5 226 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 OR11H1Q8NG94 326 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 LINC00479Q96M42 142 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 KLF12Q9Y4X4 402 aa10.32□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TRAV34A0A0B4J273 112 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 M0R3E3 92 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 ISLRO14498 428 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TSPAN4O14817 238 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 UBE2G1P62253 170 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SRSF2Q01130 221 aaKnown RBP10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 HIST2H2BDQ6DRA6 164 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TMEM88Q6PEY1 159 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 C8orf86Q6ZUL3 223 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 C11orf44Q8N8P7 122 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 OCC1Q8TAD7 63 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 ISOC2Q96AB3 205 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 FMC1Q96HJ9 113 aa10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TSSC4Q9Y5U2 329 aaPredicted RBP10.31□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TRBV6-1A0A0K0K1D8 114 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 DIRC3C9JPN6 131 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 IGLV2-8P01709 118 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 HLA-DMBP28068 263 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 CSN1S1P47710 185 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 RNF212Q495C1 297 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 GOLT1AQ6ZVE7 132 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SMCO4Q9NRQ5 59 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 AURKAIP1Q9NWT8 199 aaPredicted RBP10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 PRELID1Q9Y255 219 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 MTORP42345 2549 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 HIVEP1P15822 2718 aa10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
HLA-DPA1-243ENST00000437811 TRAV8-2A0A0B4J237 113 aa10.29□□□□□ -0.76
HLA-DPA1-243ENST00000437811 SERTM2A0A1B0GWG4 89 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms