RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 ZNF414Q96IQ9 312 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 CHRDL1Q9BU40 450 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 PARLQ9H300 379 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 TMEM167BQ9NRX6 74 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 MRPL27Q9P0M9 148 aaKnown RBP8.35□□□□□ -1.07
HMGCL-204ENST00000436439 COX7A2P2O60397 106 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 HYPMO75409 117 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 FHL3Q13643 280 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 ZNF674Q2M3X9 581 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 FAM78BQ5VT40 261 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 C10orf113Q5VZT2 155 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 CST9LP1Q5W188 147 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 PQLC2Q6ZP29 291 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 S100A7AQ86SG5 101 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 FAM24BQ8N5W8 94 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 OR11H1Q8NG94 326 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 C4orf3Q8WVX3 66 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 RNF125Q96EQ8 232 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 GNB4Q9HAV0 340 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 SEPSECSQ9HD40 501 aaKnown RBP8.35□□□□□ -1.07
HMGCL-204ENST00000436439 BIN3Q9NQY0 253 aa8.35□□□□□ -1.07
HMGCL-204ENST00000436439 IL4P05112 153 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 LGALS1P09382 135 aaKnown RBP8.34□□□□□ -1.07
HMGCL-204ENST00000436439 ARL3P36405 182 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 UBE2G2P60604 165 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 SPATA31B1PQ5VZV4 182 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 UHRF2Q96PU4 802 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 ASCL2Q99929 193 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 ZFAND3Q9H8U3 227 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 DOK5Q9P104 306 aa8.34□□□□□ -1.07
HMGCL-204ENST00000436439 PEF1Q9UBV8 284 aaKnown RBP8.34□□□□□ -1.07
HMGCL-204ENST00000436439 HUWE1Q7Z6Z7 4374 aaKnown RBP8.33□□□□□ -1.08
HMGCL-204ENST00000436439 BMPR1BO00238 502 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 NDUFA4O00483 81 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 GGCTO75223 188 aaKnown RBP8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ORM2P19652 201 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 S100A7P31151 101 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ATP5G3P48201 142 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 LYZP61626 148 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ELOBQ15370 118 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ADIRFQ15847 76 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 MIR17HGQ75NE6 70 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 LINC00305Q7Z4B0 112 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 OR1B1Q8NGR6 318 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 C11orf52Q96A22 123 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ANAPC16Q96DE5 110 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 OR5B12Q96R08 314 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 ZMAT5Q9UDW3 170 aaKnown RBP8.33□□□□□ -1.08
HMGCL-204ENST00000436439 RNF24Q9Y225 148 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 HIGD1AQ9Y241 93 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 U3KQK5 164 aa8.33□□□□□ -1.08
HMGCL-204ENST00000436439 PPP5D1E7EU14 171 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 H3BRN7 92 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 TRBV12-3P01733 135 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 IGHV3-11P01762 117 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
HMGCL-204ENST00000436439 C8orf88P0DMB2 117 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 NPPCP23582 126 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 USF2Q15853 346 aaPredicted RBP8.32□□□□□ -1.08
HMGCL-204ENST00000436439 TOMM20LQ6UXN7 152 aa8.32□□□□□ -1.08
HMGCL-204ENST00000436439 SLC25A39Q9BZJ4 359 aaPredicted RBP8.32□□□□□ -1.08
HMGCL-204ENST00000436439 YTHDF2Q9Y5A9 579 aaKnown RBP8.32□□□□□ -1.08
HMGCL-204ENST00000436439 NDUFB4O95168 129 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 MORN5Q5VZ52 161 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 GPHB5Q86YW7 130 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 STXBP6Q8NFX7 210 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 OR1N2Q8NGR9 330 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 FAM167A-AS1Q96KT0 104 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 SHANK2-AS3Q9BTD1 123 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 SLC25A2Q9BXI2 301 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 RABAC1Q9UI14 185 aa8.31□□□□□ -1.08
HMGCL-204ENST00000436439 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
HMGCL-204ENST00000436439 TRBV24-1A0A075B6N3 115 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 A0A1W2PRE2 83 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 H7BYZ3 331 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 PPP1R2P9O14990 202 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 OR7C2O60412 319 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 S100PP25815 95 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 CRYBB3P26998 211 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 ZNF503Q96F45 646 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 TMEM14CQ9P0S9 112 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 LY96Q9Y6Y9 160 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 U3KQE9 123 aa8.3□□□□□ -1.08
HMGCL-204ENST00000436439 TENM3Q9P273 2699 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 ZNF98A6NK75 572 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 C9JCJ5 164 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 K7EMT4 169 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 LGALS9O00182 355 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 CXCL1P09341 107 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 RPS10P46783 165 aaKnown RBP8.29□□□□□ -1.08
HMGCL-204ENST00000436439 SLURP1P55000 103 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 FAM106AQ4KMX7 169 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 LINC01551Q86U37 167 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 ZFP82Q8N141 532 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 TMEM190Q8WZ59 177 aa8.29□□□□□ -1.08
HMGCL-204ENST00000436439 DLX4Q92988 240 aaPredicted RBP8.29□□□□□ -1.08
HMGCL-204ENST00000436439 SAV1Q9H4B6 383 aaPredicted RBP8.29□□□□□ -1.08
HMGCL-204ENST00000436439 URGCP-MRPS24S4R325 110 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms