RNA–Protein interactions for RNA: ENST00000435997.2

SPTLC1P4-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 4, humanhuman

BASIC

Gene SPTLC1P4, Length 260 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P4-201ENST00000435997 TOMM5Q8N4H5 51 aa7.62□□□□□ -1.19
SPTLC1P4-201ENST00000435997 TMEM263Q8WUH6 116 aaKnown RBP7.62□□□□□ -1.19
SPTLC1P4-201ENST00000435997 UHRF2Q96PU4 802 aa7.62□□□□□ -1.19
SPTLC1P4-201ENST00000435997 UPK3BQ9BT76 320 aa7.62□□□□□ -1.19
SPTLC1P4-201ENST00000435997 HYPMO75409 117 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 IL5P05113 134 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 HOXB5P09067 269 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 CDKN1BP46527 198 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 UBE2MP61081 183 aaKnown RBP7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 SELENOTP62341 195 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 POLR2GP62487 172 aaKnown RBP eCLIP7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 DLK1P80370 383 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 FGL1Q08830 312 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 PSG3Q16557 428 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 TMEM14EPQ6UXP3 125 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 ZNF493Q6ZR52 646 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 SSX7Q7RTT5 188 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 MAPKAPK5-AS1Q8N8E1 139 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 MCFD2Q8NI22 146 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 ZNF503Q96F45 646 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 LINC01587Q99440 93 aa7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 ZNF331Q9NQX6 463 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 TIMM8BQ9Y5J9 83 aaPredicted RBP7.61□□□□□ -1.19
SPTLC1P4-201ENST00000435997 H7BYZ3 331 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 ADAP1O75689 374 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 CCNKO75909 580 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 KIR3DS1Q14943 382 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 C4orf46Q504U0 113 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 PATE2Q6UY27 113 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 Q8N1X5 172 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 RPUSD4Q96CM3 377 aaKnown RBP7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 C20orf144Q9BQM9 153 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 ARV1Q9H2C2 271 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 Q9H3A6 140 aa7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 NOP10Q9NPE3 64 aaKnown RBP7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 APOBP04114 4563 aaKnown RBP7.6□□□□□ -1.19
SPTLC1P4-201ENST00000435997 C9orf170A2RU37 121 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 SMCO3A2RU48 225 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 SSSCA1O60232 199 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 OR5G3P0C626 314 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 PRB4P10163 310 aaPredicted RBP7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 M6PRP20645 277 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 PYDC2Q56P42 97 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 TTC32Q5I0X7 151 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 LCN15Q6UWW0 184 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 CCDC190Q86UF4 302 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 OR10J6PQ8NGY7 276 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 SMIM8Q96KF7 97 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 Q9H8V8 135 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 PSENENQ9NZ42 101 aa7.59□□□□□ -1.19
SPTLC1P4-201ENST00000435997 TRAV26-1A0A087WT03 109 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 A0A1W2PPQ1 181 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 H3BNG1 76 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ZNF701M0R085 212 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 SLC17A3O00476 420 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 BTF3P20290 206 aaKnown RBP7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 HOXA5P20719 270 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 KRTAP10-2P60368 255 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 RHOBP62745 196 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 SLC38A11Q08AI6 406 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 XP32Q5T750 250 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 PXDC1Q5TGL8 231 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 GFI1BQ5VTD9 330 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 S100A7AQ86SG5 101 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ZBTB8BQ8NAP8 495 aaPredicted RBP7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 RXFP4Q8TDU9 374 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 SLC50A1Q9BRV3 221 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ARL6Q9H0F7 186 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 RNF24Q9Y225 148 aa7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 RCL1Q9Y2P8 373 aaKnown RBP7.58□□□□□ -1.2
SPTLC1P4-201ENST00000435997 NOL3O60936 208 aaKnown RBP7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 TSC22D2O75157 780 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 NDUFB6O95139 128 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 METTL15P1P0C7V9 234 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 HTN1P15515 57 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 TAS2R30P59541 319 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 RRAS2P62070 204 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ARL16Q0P5N6 197 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 CLINT1Q14677 625 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 MORN5Q5VZ52 161 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 TEPPQ6URK8 271 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ZNF546Q86UE3 836 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 TMEM37Q8WXS4 190 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 GNPNAT1Q96EK6 184 aaPredicted RBP7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 C18orf15Q96N68 181 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ODF3Q96PU9 254 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 SRRQ9GZT4 340 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 NPVFQ9HCQ7 196 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 MRPS16Q9Y3D3 137 aaKnown RBP7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 DNAH5Q8TE73 4624 aa7.57□□□□□ -1.2
SPTLC1P4-201ENST00000435997 PRAC2D3DTV9 90 aa7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 J3QL48 77 aa7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 AGPAT2O15120 278 aa7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 BTCP35070 178 aa7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 DAZ2Q13117 558 aaKnown RBP7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 ESRGQ1W209 222 aa7.56□□□□□ -1.2
SPTLC1P4-201ENST00000435997 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms