RNA–Protein interactions for RNA: ENST00000435706.6

TOP2B-204, Transcript of DNA topoisomerase II beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOP2B, Length 5,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-204ENST00000435706 C9orf139Q6ZV77 190 aa18.2■□□□□ 0.5
TOP2B-204ENST00000435706 NTN3O00634 580 aaPredicted RBP18.2■□□□□ 0.5
TOP2B-204ENST00000435706 SPACA3Q8IXA5 215 aa18.2■□□□□ 0.5
TOP2B-204ENST00000435706 TMEM178BH3BS89 294 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.19■□□□□ 0.5
TOP2B-204ENST00000435706 Q0VFX4 171 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 LGALS9BQ3B8N2 356 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 LGALS9CQ6DKI2 356 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 PRSS46E5RG02 174 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 CDKN1BP46527 198 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 SPANXA1Q9NS26 97 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18.19■□□□□ 0.5
TOP2B-204ENST00000435706 PPDPFLQ8WWR9 84 aa18.19■□□□□ 0.5
TOP2B-204ENST00000435706 SRRM4A7MD48 611 aaKnown RBP18.18■□□□□ 0.5
TOP2B-204ENST00000435706 C11orf52Q96A22 123 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 C7orf69Q9H7B7 122 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 PDE6HQ13956 83 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 COA6Q5JTJ3 125 aaKnown RBP18.18■□□□□ 0.5
TOP2B-204ENST00000435706 ATP6V0BQ99437 205 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 CRPP02741 224 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 GATD1Q8NB37 220 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 LINC00477Q96M19 166 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 COX6B1P14854 86 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 TMEM86BQ8N661 226 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 GAGE12HA6NDE8 117 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 WISP1O95388 367 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 PEMTQ9UBM1 199 aa18.18■□□□□ 0.5
TOP2B-204ENST00000435706 LTBP1Q14766 1721 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 MYLKQ15746 1914 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 LINC00527Q9UJ94 153 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 TRAV41A0A0B4J266 112 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 A0A1W2PPI3 338 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 ADARB2-AS1A8MUL3 147 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 UNQ6494/PRO21346Q6UXR6 183 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 TRBV20-1A0A075B6N2 111 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 MALP21145 153 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 ABHD17AQ96GS6 310 aa18.17■□□□□ 0.5
TOP2B-204ENST00000435706 IGLC7A0M8Q6 106 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 C5orf64Q2M2E5 130 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 VWC2Q2TAL6 325 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 ERCC8Q13216 396 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 DOCK11Q5JSL3 2073 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 Q6ZVH6 145 aa18.16■□□□□ 0.5
TOP2B-204ENST00000435706 C8orf49Q96NF6 230 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 TIMM21Q9BVV7 248 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 NDPQ00604 133 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 Q8N8P6 123 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 BUB1B-PAK6H3BSN5 160 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 ETV2O00321 342 aaPredicted RBP18.15■□□□□ 0.5
TOP2B-204ENST00000435706 ZNF524Q96C55 264 aa18.15■□□□□ 0.5
TOP2B-204ENST00000435706 PHF3Q92576 2039 aaKnown RBP18.15■□□□□ 0.5
TOP2B-204ENST00000435706 CSRP1P21291 193 aaKnown RBP18.14■□□□□ 0.5
TOP2B-204ENST00000435706 FAM168AQ92567 244 aa18.14■□□□□ 0.5
TOP2B-204ENST00000435706 IGHV3-73A0A0B4J1V6 119 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 AZU1P20160 251 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 LMO1P25800 156 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 KIAA2026Q5HYC2 2103 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 PLXNA3P51805 1871 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 MRPL51Q4U2R6 128 aaKnown RBP18.14■□□□□ 0.49
TOP2B-204ENST00000435706 H3BMM0 161 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 THBDP07204 575 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 RASL10AQ92737 203 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 UBE2WQ96B02 151 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 ZSWIM8A7E2V4 1837 aa18.14■□□□□ 0.49
TOP2B-204ENST00000435706 STHQ8IWL8 128 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 FANCMQ8IYD8 2048 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 KLRD1Q13241 179 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 K7EN84 100 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 CCL25O15444 150 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 C9orf153Q5TBE3 101 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 NDUFA4L2Q9NRX3 87 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 COLQQ9Y215 455 aaPredicted RBP18.13■□□□□ 0.49
TOP2B-204ENST00000435706 MYMXA0A1B0GTQ4 84 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 SLC25A16P16260 332 aa18.13■□□□□ 0.49
TOP2B-204ENST00000435706 SPXQ9BT56 116 aa18.12■□□□□ 0.49
TOP2B-204ENST00000435706 GAGE2AQ6NT46 116 aa18.12■□□□□ 0.49
TOP2B-204ENST00000435706 PYGO2Q9BRQ0 406 aa18.12■□□□□ 0.49
TOP2B-204ENST00000435706 SIGLEC8Q9NYZ4 499 aa18.12■□□□□ 0.49
TOP2B-204ENST00000435706 ZNF672Q499Z4 452 aaPredicted RBP18.11■□□□□ 0.49
TOP2B-204ENST00000435706 TRPM7Q96QT4 1865 aa18.11■□□□□ 0.49
TOP2B-204ENST00000435706 PAX4O43316 350 aa18.11■□□□□ 0.49
TOP2B-204ENST00000435706 CEND1Q8N111 149 aa18.11■□□□□ 0.49
TOP2B-204ENST00000435706 ZNRD1Q9P1U0 126 aa18.11■□□□□ 0.49
TOP2B-204ENST00000435706 TRBV19A0A075B6N1 114 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 C2orf66Q6UXQ4 117 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 PRDM6Q9NQX0 595 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 VMO1Q7Z5L0 202 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 A0A087WWL8 130 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 TRBV7-1A0A0A6YYK4 115 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 K7ERJ3 54 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 S100A7L2Q5SY68 101 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 CHCHD5Q9BSY4 110 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 ASPHD1Q5U4P2 390 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 NEGR1Q7Z3B1 354 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 SRSF8Q9BRL6 282 aaKnown RBP18.1■□□□□ 0.49
TOP2B-204ENST00000435706 OVOL2Q9BRP0 275 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 CEP250Q9BV73 2442 aa18.1■□□□□ 0.49
TOP2B-204ENST00000435706 OOSP1A8MZH6 123 aa18.09■□□□□ 0.49
TOP2B-204ENST00000435706 H3BMG7 143 aa18.09■□□□□ 0.49
TOP2B-204ENST00000435706 SIVA1O15304 175 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms