RNA–Protein interactions for RNA: ENST00000433889.1

SCG2-203, Transcript of secretogranin II, humanhuman

TSL 4

Gene SCG2, Length 544 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-203ENST00000433889 NIT2Q9NQR4 276 aa0.52□□□□□ -2.33
SCG2-203ENST00000433889 COL1A1P02452 1464 aaPredicted RBP0.52□□□□□ -2.33
SCG2-203ENST00000433889 CECR2Q9BXF3 1484 aa0.52□□□□□ -2.33
SCG2-203ENST00000433889 CEP164Q9UPV0 1460 aa0.52□□□□□ -2.33
SCG2-203ENST00000433889 N4BP2Q86UW6 1770 aaPredicted RBP0.52□□□□□ -2.33
SCG2-203ENST00000433889 A0A087WSZ3 146 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 RER1O15258 196 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 KDELR1P24390 212 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 HOXA6P31267 233 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 CAPZBP47756 277 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 VBP1P61758 197 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 ARF6P62330 175 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 EIF3IQ13347 325 aaKnown RBP0.51□□□□□ -2.33
SCG2-203ENST00000433889 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
SCG2-203ENST00000433889 SPATA45Q537H7 98 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 KRTAP26-1Q6PEX3 210 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 ARPINQ7Z6K5 226 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 ZGRF1Q86YA3 2104 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 EXOC3-AS1Q8N2X6 119 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 OR10AC1Q8NH08 325 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 OR13C6PQ8NH95 151 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 HYLS1Q96M11 299 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 SS18L2Q9UHA2 77 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 PRNDQ9UKY0 176 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 NISCHQ9Y2I1 1504 aa0.51□□□□□ -2.33
SCG2-203ENST00000433889 TRAV27A0A087WT01 109 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 hDV103S1A0JD37 113 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 LYRM1O43325 122 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 C1QBP02746 253 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 TRGC2P03986 189 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 OGNP20774 298 aaKnown RBP0.5□□□□□ -2.33
SCG2-203ENST00000433889 INSL3P51460 131 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 MSMO1Q15800 293 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 TMEM14EPQ6UXP3 125 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 GRINAQ7Z429 371 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 LYRM2Q9NU23 88 aaPredicted RBP0.5□□□□□ -2.33
SCG2-203ENST00000433889 STOML2Q9UJZ1 356 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 FREM3P0C091 2139 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 SPTBP11277 2137 aa0.5□□□□□ -2.33
SCG2-203ENST00000433889 PIK3C2AO00443 1686 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 PHRF1Q9P1Y6 1649 aaKnown RBP0.49□□□□□ -2.33
SCG2-203ENST00000433889 UHRF1BP1Q6BDS2 1440 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 EIF3AQ14152 1382 aaKnown RBP0.49□□□□□ -2.33
SCG2-203ENST00000433889 TRAV5A0A0B4J249 113 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 C9orf170A2RU37 121 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 C5orf67F2Z3F1 127 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 HIST1H2BKO60814 126 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 MT-ND6P03923 174 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 HIST1H2BJP06899 126 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 RPL19P84098 196 aaKnown RBP0.49□□□□□ -2.33
SCG2-203ENST00000433889 VMA21Q3ZAQ7 101 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 DHRS4L2Q6PKH6 230 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 PATE2Q6UY27 113 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 Q86TA4 180 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 OR10AG1Q8NH19 301 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 NEK7Q8TDX7 302 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 MALSU1Q96EH3 234 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 ZC2HC1AQ96GY0 325 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 HSPB8Q9UJY1 196 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 ADGBQ8N7X0 1667 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 TET1Q8NFU7 2136 aa0.49□□□□□ -2.33
SCG2-203ENST00000433889 RFX7Q2KHR2 1363 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 GPR31O00270 319 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 IFNA1P01562 189 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 IGLV1-51P01701 117 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 GPX7Q96SL4 187 aaPredicted RBP0.48□□□□□ -2.33
SCG2-203ENST00000433889 MYH2Q9UKX2 1941 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 CAMSAP2Q08AD1 1489 aa0.48□□□□□ -2.33
SCG2-203ENST00000433889 ZCCHC11Q5TAX3 1644 aaKnown RBP0.47□□□□□ -2.33
SCG2-203ENST00000433889 CD14P08571 375 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 SPINT3P49223 89 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 SPINK9Q5DT21 86 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 KRTAP19-3Q7Z4W3 81 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 TMED4Q7Z7H5 227 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 GINS3Q9BRX5 216 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 CCDC94Q9BW85 323 aaPredicted RBP0.47□□□□□ -2.33
SCG2-203ENST00000433889 SH3BGRL3Q9H299 93 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 MED11Q9P086 117 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 BOKQ9UMX3 212 aaPredicted RBP0.47□□□□□ -2.33
SCG2-203ENST00000433889 RNF11Q9Y3C5 154 aa0.47□□□□□ -2.33
SCG2-203ENST00000433889 TRBV30A0A0K0K1B3 111 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 ZNF727A8MUV8 499 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 C5orf58C9J3I9 102 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 CST7O76096 145 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 IDO1P14902 403 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 TAS2R41P59536 307 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 HBBP68871 147 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 FAM216BQ8N7L0 139 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 NUP35Q8NFH5 326 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 DYDC1Q8WWB3 177 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 AP3S1Q92572 193 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 PRRT1Q99946 306 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 PTPRDP23468 1912 aa0.46□□□□□ -2.34
SCG2-203ENST00000433889 COL24A1Q17RW2 1714 aa0.45□□□□□ -2.34
SCG2-203ENST00000433889 RPL35P42766 123 aaKnown RBP0.45□□□□□ -2.34
SCG2-203ENST00000433889 TCTAP57738 103 aa0.45□□□□□ -2.34
SCG2-203ENST00000433889 FXYD4P59646 89 aa0.45□□□□□ -2.34
SCG2-203ENST00000433889 GNG3P63215 75 aa0.45□□□□□ -2.34
SCG2-203ENST00000433889 DIAPH2-AS1Q14236 149 aa0.45□□□□□ -2.34
SCG2-203ENST00000433889 POU6F1Q14863 301 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms