RNA–Protein interactions for RNA: ENST00000433394.1

USP54-206, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 5

Gene USP54, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-206ENST00000433394 SELENOWP63302 87 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 MEF2BQ02080 365 aaPredicted RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 HAGHLQ6PII5 290 aaPredicted RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 OOSP2Q86WS3 158 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ACBD7Q8N6N7 88 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 SLC30A7Q8NEW0 376 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ZNF675Q8TD23 568 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 SFT2D1Q8WV19 159 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ROPN1LQ96C74 230 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ISOC1Q96CN7 298 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 OR51I2Q9H344 312 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 Q9H521 79 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ACER3Q9NUN7 267 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 MED29Q9NX70 200 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 FBXL12Q9NXK8 326 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 IDI2-AS1Q9NZ38 188 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 GOLGA4Q13439 2230 aaKnown RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 UNC80Q8N2C7 3258 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 ZFC3H1O60293 1989 aaKnown RBP2.94□□□□□ -1.94
USP54-206ENST00000433394 ATG2BQ96BY7 2078 aa2.94□□□□□ -1.94
USP54-206ENST00000433394 PI4KAP42356 2102 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 SMIM31A0A1B0GVY4 71 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 C17orf98A8MV24 154 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 C10orf142B7Z368 130 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 H7C1C5 153 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 J3KT08 172 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 M0R2Z0 102 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 AIPO00170 330 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 LY6HO94772 140 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 TTRP02766 147 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 FGF7P21781 194 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 CMPK1P30085 196 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 REG1BP48304 166 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 TAS2R30P59541 319 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 LCN6P62502 163 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 GNGT1P63211 74 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 OCIAD2Q56VL3 154 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 C1orf194Q5T5A4 169 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 SFXN4Q6P4A7 337 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 SCIMPQ6UWF3 145 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 ZNF767PQ75MW2 155 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 C4orf33Q8N1A6 199 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 OR5A1Q8NGJ0 315 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 COX14Q96I36 57 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 CCDC115Q96NT0 180 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 C20orf27Q9GZN8 174 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 SH3BGRL3Q9H299 93 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 MED11Q9P086 117 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 RSL24D1Q9UHA3 163 aaKnown RBP2.93□□□□□ -1.94
USP54-206ENST00000433394 TRAPPC2LQ9UL33 140 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 U3KQ87 197 aa2.93□□□□□ -1.94
USP54-206ENST00000433394 A0A0C4DFX4 3053 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 WDR87Q6ZQQ6 2873 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 MEIKINA0A087WXM9 373 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 EEF1E1-BLOC1S5C9J1V9 151 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 GNG7O60262 68 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 EDF1O60869 148 aaKnown RBP2.92□□□□□ -1.94
USP54-206ENST00000433394 PIRTP0C851 137 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 HLA-EP13747 358 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 GNG5P63218 68 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 RHEBQ15382 184 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 OR8B8Q15620 311 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 GOLT1AQ6ZVE7 132 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 C12orf45Q8N5I9 185 aaPredicted RBP2.92□□□□□ -1.94
USP54-206ENST00000433394 TMEM86BQ8N661 226 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 OR4C16Q8NGL9 310 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 POP5Q969H6 163 aaKnown RBP2.92□□□□□ -1.94
USP54-206ENST00000433394 C20orf166-AS1Q96NR2 134 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 TP53RKQ96S44 253 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 UPK3BQ9BT76 320 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 DOHHQ9BU89 302 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 SAR1AQ9NR31 198 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 SCP2D1Q9UJQ7 156 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 PRNDQ9UKY0 176 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 PKIGQ9Y2B9 76 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 ZFP30Q9Y2G7 519 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 COL6A3P12111 3177 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 EYSQ5T1H1 3165 aa2.92□□□□□ -1.94
USP54-206ENST00000433394 CEP192Q8TEP8 1941 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 SPTBN5Q9NRC6 3674 aaKnown RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 HEATR5BQ9P2D3 2071 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 C17orf51A8MQB3 221 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 A8MT66 165 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 INMT-MINDY4F8WBC2 141 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 J3QR89 54 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 M0R381 172 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 OR1I1O60431 355 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 SOD1P00441 154 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 CRHBPP24387 322 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 NCS1P62166 190 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 RPS28P62857 69 aaKnown RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 PMAIP1Q13794 54 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 JOSD1Q15040 202 aaPredicted RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 IAH1Q2TAA2 248 aaPredicted RBP2.91□□□□□ -1.94
USP54-206ENST00000433394 TEX261Q6UWH6 196 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 SBSNQ6UWP8 590 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 OR11H6Q8NGC7 330 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 ACOT12Q8WYK0 555 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 SLC7A6Q92536 515 aa2.91□□□□□ -1.94
USP54-206ENST00000433394 MALSU1Q96EH3 234 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms