RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 NPVFQ9HCQ7 196 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 CHCHD2Q9Y6H1 151 aaPredicted RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 MON2Q7Z3U7 1717 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 ARHGAP5Q13017 1502 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 LMTK2Q8IWU2 1503 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PPLO60437 1756 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 INO80Q9ULG1 1556 aaPredicted RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 MAGI2Q86UL8 1455 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 CEP164Q9UPV0 1460 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 KNDC1Q76NI1 1749 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 TRBV20-1A0A075B6N2 111 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IGHV1-45A0A0A0MS14 117 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IGHV5-51A0A0C4DH38 117 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 C9JCJ5 164 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 INS-IGF2F8WCM5 200 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 H3BQ15 152 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PDCD5O14737 125 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 SOCS1O15524 211 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HRASP01112 189 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 C1QAP02745 245 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 NMBP08949 121 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 SRP19P09132 144 aaKnown RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 PYYP10082 97 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HBBP68871 147 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 ZNF90Q03938 601 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 AKR1C1Q04828 323 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IQCJQ1A5X6 159 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 ZNF101Q8IZC7 436 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 HIST3H2BBQ8N257 126 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 DAND5Q8N907 189 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 LINC00301Q8NCQ3 95 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OR4B1Q8NGF8 309 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OR5H2Q8NGV7 314 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 OTOSQ8NHW6 89 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 LSM10Q969L4 123 aaKnown RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 C2orf50Q96LR7 162 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PLA2G12AQ9BZM1 189 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 TUBA4BQ9H853 241 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 BET1LQ9NYM9 111 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 IL36BQ9NZH7 164 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 EPDR1Q9UM22 224 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 LSM2Q9Y333 95 aaKnown RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 KLK5Q9Y337 293 aaPredicted RBP1.64□□□□□ -2.15
CLK1-204ENST00000432425 LINC00312Q9Y6C7 94 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 TMEM131LA2VDJ0 1609 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 PLXNA4Q9HCM2 1894 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 MAPKBP1O60336 1514 aa1.64□□□□□ -2.15
CLK1-204ENST00000432425 RGPD3A6NKT7 1758 aaPredicted RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 DIP2BQ9P265 1576 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 GRIFINA4D1Z8 144 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 SYNGR2O43760 224 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 IGKV1-16P04430 117 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 ZNF688P0C7X2 276 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 HLA-DRB4P13762 266 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 SRP14P37108 136 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 DYNLT3P51808 116 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 CMC4P56277 68 aaPredicted RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 RPL26P61254 145 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 RPL30P62888 115 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 UBE2BP63146 152 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 QRFPP83859 136 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 ATP5G2Q06055 141 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 FOXF1Q12946 379 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 LGALS9BQ3B8N2 356 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 LINC01554Q52M75 96 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 LGALS9CQ6DKI2 356 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 AMTNQ6UX39 209 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 SCXQ7RTU7 201 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 TEN1Q86WV5 123 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 OR4X2Q8NGF9 303 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 OR5AK2Q8NH90 309 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 MRPS24Q96EL2 167 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 AGPAT4-IT1Q9H0P7 198 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 ZNF286AQ9HBT8 521 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 TAC3Q9UHF0 121 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 NOP16Q9Y3C1 178 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 HLA-DRB4X5D2U9 266 aa1.63□□□□□ -2.15
CLK1-204ENST00000432425 PPRC1Q5VV67 1664 aaKnown RBP1.63□□□□□ -2.15
CLK1-204ENST00000432425 RIMBP3CA6NJZ7 1639 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 RIMBP3BA6NNM3 1639 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 RIMBP3Q9UFD9 1639 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 MYO9BQ13459 2157 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 PTPRDP23468 1912 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 ABCC3O15438 1527 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 MAGI3Q5TCQ9 1506 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 PIK3C2AO00443 1686 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 EXPH5Q8NEV8 1989 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TRAV12-2A0A075B6T6 113 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 IGHV3-74A0A0B4J1X5 117 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 IGHV3-72A0A0B4J1Y9 119 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 A0A0D9SG52 128 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TRBV27A0A0K0K1C4 114 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TCRBV3S1A0A5B6 114 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 UQCRQO14949 82 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 PRM2P04554 102 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 TRGC1P0CF51 173 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 FABP4P15090 132 aa1.62□□□□□ -2.15
CLK1-204ENST00000432425 RNASE4P34096 147 aaKnown RBP1.62□□□□□ -2.15
CLK1-204ENST00000432425 FGF12P61328 243 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms