RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 CCDC28AQ8IWP9 274 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 SMPXQ9UHP9 88 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 A0A087X0K7 114 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 F6UZH7 168 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 ATF4P18848 351 aaPredicted RBP13.88□□□□□ -0.19
HMGN1-206ENST00000431390 SLURP1P55000 103 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 SHISA2Q6UWI4 295 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 GLMPQ8WWB7 406 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 LINC00052Q96N35 136 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 ELOVL1Q9BW60 279 aa13.88□□□□□ -0.19
HMGN1-206ENST00000431390 IGHV3OR16-13A0A075B7E8 117 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 IGHV3-49A0A0A0MS15 119 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 IGHV3-74A0A0B4J1X5 117 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 IGHV3-66A0A0C4DH42 116 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 A0A1W2PRX2 142 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 TMEM213A2RRL7 107 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 GGTLC3B5MD39 225 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 DEFA6Q01524 100 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 HIST2H2BDQ6DRA6 164 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 NDUFA11Q86Y39 141 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 LYPD1Q8N2G4 141 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 CYB561D1Q8N8Q1 229 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 RAX2Q96IS3 184 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 SEC11CQ9BY50 192 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 SMAD5-AS1Q9Y6J3 95 aa13.87□□□□□ -0.19
HMGN1-206ENST00000431390 CHEK1O14757 476 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 ZNF253O75346 499 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 SNRPCP09234 159 aaKnown RBP13.86□□□□□ -0.19
HMGN1-206ENST00000431390 MYCNOSP40205 109 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 MEOX2P50222 304 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 RANP62826 216 aaKnown RBP13.86□□□□□ -0.19
HMGN1-206ENST00000431390 SUMO1P63165 101 aaKnown RBP13.86□□□□□ -0.19
HMGN1-206ENST00000431390 SIGLEC15Q6ZMC9 328 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 TCEAL7Q9BRU2 100 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 RHPN1-AS1Q9BWJ2 59 aa13.86□□□□□ -0.19
HMGN1-206ENST00000431390 ADARB2-AS1A8MUL3 147 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 F8W036 122 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 CCL24O00175 119 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 NDUFB4O95168 129 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 ADCYAP1P18509 176 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 C10orf91Q5T1B1 145 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 C11orf52Q96A22 123 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 DUX3Q96PT4 197 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 Q9H3A6 140 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 OTORQ9NRC9 128 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 PEMTQ9UBM1 199 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 TRRAPQ9Y4A5 3859 aa13.85□□□□□ -0.19
HMGN1-206ENST00000431390 ZNF785A8K8V0 405 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 H3BTX0 84 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 PSG9Q00887 426 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 SOHLH1Q5JUK2 328 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 FAM90A2PQ658T7 463 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 C17orf77Q96MU5 243 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 TGP01266 2768 aa13.84□□□□□ -0.19
HMGN1-206ENST00000431390 HELTA6NFD8 242 aa13.83□□□□□ -0.19
HMGN1-206ENST00000431390 C2orf70A6NJV1 201 aa13.83□□□□□ -0.19
HMGN1-206ENST00000431390 CARHSP1Q9Y2V2 147 aaKnown RBP13.83□□□□□ -0.19
HMGN1-206ENST00000431390 PGPA6NDG6 321 aa13.83□□□□□ -0.2
HMGN1-206ENST00000431390 SLC17A3O00476 420 aa13.83□□□□□ -0.2
HMGN1-206ENST00000431390 CEBPGP53567 150 aa13.83□□□□□ -0.2
HMGN1-206ENST00000431390 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.83□□□□□ -0.2
HMGN1-206ENST00000431390 OR9G4Q8NGQ1 327 aa13.83□□□□□ -0.2
HMGN1-206ENST00000431390 DLX4Q92988 240 aaPredicted RBP13.83□□□□□ -0.2
HMGN1-206ENST00000431390 SCO2A0A1W2PP80 73 aa13.82□□□□□ -0.2
HMGN1-206ENST00000431390 CBLN1P23435 193 aa13.82□□□□□ -0.2
HMGN1-206ENST00000431390 C5orf17Q8NAS9 161 aa13.82□□□□□ -0.2
HMGN1-206ENST00000431390 SLC50A1Q9BRV3 221 aa13.82□□□□□ -0.2
HMGN1-206ENST00000431390 AAMDCQ9H7C9 122 aa13.82□□□□□ -0.2
HMGN1-206ENST00000431390 M0QZ24 198 aa13.81□□□□□ -0.2
HMGN1-206ENST00000431390 EDN2P20800 178 aa13.81□□□□□ -0.2
HMGN1-206ENST00000431390 NSUN5P1Q3KNT7 163 aa13.81□□□□□ -0.2
HMGN1-206ENST00000431390 FAM74A3Q4VXF1 159 aa13.81□□□□□ -0.2
HMGN1-206ENST00000431390 HIST1H2BAQ96A08 127 aa13.81□□□□□ -0.2
HMGN1-206ENST00000431390 RPUSD4Q96CM3 377 aaKnown RBP13.81□□□□□ -0.2
HMGN1-206ENST00000431390 SLC25A5P05141 298 aaKnown RBP13.8□□□□□ -0.2
HMGN1-206ENST00000431390 FOLR2P14207 255 aa13.8□□□□□ -0.2
HMGN1-206ENST00000431390 EXOC3-AS1Q8N2X6 119 aa13.8□□□□□ -0.2
HMGN1-206ENST00000431390 PARLQ9H300 379 aa13.8□□□□□ -0.2
HMGN1-206ENST00000431390 ZNF331Q9NQX6 463 aaPredicted RBP13.8□□□□□ -0.2
HMGN1-206ENST00000431390 EPDR1Q9UM22 224 aa13.8□□□□□ -0.2
HMGN1-206ENST00000431390 TCF24Q7RTU0 167 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 ARL6IP6Q8N6S5 226 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 CMTM2Q8TAZ6 248 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 CITED1Q99966 193 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 ZNF727A8MUV8 499 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 PEX7O00628 323 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 APOC3P02656 99 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 C2CD4CQ8TF44 421 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 SMIM7Q9BQ49 75 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 NRN1Q9NPD7 142 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 CLEC5AQ9NY25 188 aa13.79□□□□□ -0.2
HMGN1-206ENST00000431390 OVOL1O14753 267 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 CSN3P07498 182 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 SAMD13Q5VXD3 122 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 ADAMTSL5Q6ZMM2 481 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 NIPSNAP3BQ9BS92 247 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 ATG101Q9BSB4 218 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 PRELID1Q9Y255 219 aa13.78□□□□□ -0.2
HMGN1-206ENST00000431390 TCRAP04437 139 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms