RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 IGHV2OR16-5A0A0B4J2B6 119 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 NDUFB1O75438 58 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 SRSF7Q16629 238 aaKnown RBP eCLIP13.54□□□□□ -0.24
RIF1-204ENST00000430328 DEFB105AQ8NG35 78 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 ANK1P16157 1881 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 I3L3M4 83 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 MUSTN1Q8IVN3 82 aa13.54□□□□□ -0.24
RIF1-204ENST00000430328 A0A1B0GTI1 187 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 K7ERS5 55 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 TREML4Q6UXN2 200 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 GFRA4Q9GZZ7 299 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 ORMDL1Q9P0S3 153 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 R3HDMLQ9H3Y0 253 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 WDR83OSQ9Y284 106 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 TRAV12-2A0A075B6T6 113 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 MED13Q9UHV7 2174 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 PSG7Q13046 419 aa13.53□□□□□ -0.24
RIF1-204ENST00000430328 PROP1O75360 226 aa13.52□□□□□ -0.24
RIF1-204ENST00000430328 DEFB130BP0DP73 79 aa13.52□□□□□ -0.24
RIF1-204ENST00000430328 DEFB130AP0DP74 79 aa13.52□□□□□ -0.24
RIF1-204ENST00000430328 TEX48A0A1B0GUV7 120 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 RFNGQ9Y644 331 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 PATE3B3GLJ2 98 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 NPSP0C0P6 89 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 LILRA6Q6PI73 481 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 RMI2Q96E14 147 aa13.52□□□□□ -0.25
RIF1-204ENST00000430328 BVES-AS1Q5T3Y7 98 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 Q8TAT8 98 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 PLAC1Q9HBJ0 212 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 TIMM23O14925 209 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 COX6A1P12074 109 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 C20orf144Q9BQM9 153 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 CRYGCP07315 174 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 IGKV1D-13A0A0B4J2D9 117 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 NXPH4O95158 308 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 IGKV1-13P0DP09 117 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 USP54Q70EL1 1684 aa13.51□□□□□ -0.25
RIF1-204ENST00000430328 RNASE2P10153 161 aaKnown RBP13.5□□□□□ -0.25
RIF1-204ENST00000430328 PSMB8P28062 276 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 ID3Q02535 119 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 FAM27E3Q08E93 113 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 CACNA1HO95180 2353 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 POLR3KQ9Y2Y1 108 aaPredicted RBP13.5□□□□□ -0.25
RIF1-204ENST00000430328 BAALC-AS2P0C853 105 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 IGLC2P0DOY2 106 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 IGLC3P0DOY3 106 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 PRSS57Q6UWY2 283 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 WFDC1Q9HC57 220 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 A0A0A6YYD4 124 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 IGFBPL1Q8WX77 278 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 IGKV1-8A0A0C4DH67 115 aa13.5□□□□□ -0.25
RIF1-204ENST00000430328 USF3Q68DE3 2245 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 NDPQ00604 133 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 GLRX5Q86SX6 157 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 COX8AP10176 69 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 PRR31Q5SQ13 230 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 RICTORQ6R327 1708 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 U3KQE9 123 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 DAD1P61803 113 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 UBE2BP63146 152 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 NDUFA12Q9UI09 145 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 CDKN1AP38936 164 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 USMG5Q96IX5 58 aa13.49□□□□□ -0.25
RIF1-204ENST00000430328 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 F5H768 121 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 C1QCP02747 245 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 SMRP1Q8NCR6 262 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 CFHR4Q92496 578 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 TSC2P49815 1807 aa13.48□□□□□ -0.25
RIF1-204ENST00000430328 PRSS29PA6NIE9 313 aa13.47□□□□□ -0.25
RIF1-204ENST00000430328 Q0VG73 95 aa13.47□□□□□ -0.25
RIF1-204ENST00000430328 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.47□□□□□ -0.25
RIF1-204ENST00000430328 SPATA31B1PQ5VZV4 182 aa13.47□□□□□ -0.25
RIF1-204ENST00000430328 TAX1BP3O14907 124 aa13.47□□□□□ -0.25
RIF1-204ENST00000430328 DLEC1Q9Y238 1755 aa13.47□□□□□ -0.25
RIF1-204ENST00000430328 RSPO4Q2I0M5 234 aaPredicted RBP13.46□□□□□ -0.25
RIF1-204ENST00000430328 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 FNDC10F2Z333 226 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 LY6G6FQ5SQ64 297 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 STRCP1A6NGW2 1772 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 H3BQ85 93 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 ARMS2P0C7Q2 107 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 C2orf66Q6UXQ4 117 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 MSRB2Q9Y3D2 182 aa13.46□□□□□ -0.25
RIF1-204ENST00000430328 IL9P15248 144 aa13.46□□□□□ -0.26
RIF1-204ENST00000430328 TFF2Q03403 129 aa13.46□□□□□ -0.26
RIF1-204ENST00000430328 THBDP07204 575 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 RNF166Q96A37 237 aaPredicted RBP13.45□□□□□ -0.26
RIF1-204ENST00000430328 PDE6HQ13956 83 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 PKIGQ9Y2B9 76 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 PLXNA1Q9UIW2 1896 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 HERVK_113P63121 156 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 NMSQ5H8A3 153 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 DUX4L9Q6RFH8 374 aaPredicted RBP13.45□□□□□ -0.26
RIF1-204ENST00000430328 NTN5Q8WTR8 489 aaPredicted RBP13.45□□□□□ -0.26
RIF1-204ENST00000430328 LINC00527Q9UJ94 153 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 KLHL30-AS1Q8NEE0 82 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 V9GYY9 64 aa13.45□□□□□ -0.26
RIF1-204ENST00000430328 SORL1Q92673 2214 aa13.44□□□□□ -0.26
RIF1-204ENST00000430328 PIP4P2Q8N4L2 257 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms