RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 APOC4P55056 127 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 Q6ZWC4 215 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 MIR17HGQ75NE6 70 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 OR2G3Q8NGZ4 309 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 IL17DQ8TAD2 202 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 RNF183Q96D59 192 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
UBE3D-204ENST00000430071 ZNF688P0C7X2 276 aa12.42□□□□□ -0.42
UBE3D-204ENST00000430071 DEFB131AP59861 70 aa12.42□□□□□ -0.42
UBE3D-204ENST00000430071 RAB2AP61019 212 aa12.42□□□□□ -0.42
UBE3D-204ENST00000430071 ZFP69Q49AA0 526 aa12.42□□□□□ -0.42
UBE3D-204ENST00000430071 RNF24Q9Y225 148 aa12.42□□□□□ -0.42
UBE3D-204ENST00000430071 KIR2DL5BA0A0G2JN68 375 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 KIR2DL5BA0A0G2JPC4 375 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 SNRPCP09234 159 aaKnown RBP12.41□□□□□ -0.42
UBE3D-204ENST00000430071 M6PRP20645 277 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
UBE3D-204ENST00000430071 BPIFA4PQ86YQ2 179 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 KIR2DL5AQ8N109 375 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 KIR2DL5BQ8NHK3 375 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
UBE3D-204ENST00000430071 FAM167A-AS1Q96KT0 104 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 SLC25A2Q9BXI2 301 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 FUT9Q9Y231 359 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 TP53TG1Q9Y2A0 90 aa12.41□□□□□ -0.42
UBE3D-204ENST00000430071 A0A087X0K7 114 aa12.4□□□□□ -0.42
UBE3D-204ENST00000430071 KANTRA0A1W2PQU2 76 aa12.4□□□□□ -0.42
UBE3D-204ENST00000430071 UBE2CO00762 179 aa12.4□□□□□ -0.42
UBE3D-204ENST00000430071 PFDN1O60925 122 aa12.4□□□□□ -0.42
UBE3D-204ENST00000430071 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
UBE3D-204ENST00000430071 ATF4P18848 351 aaPredicted RBP12.4□□□□□ -0.42
UBE3D-204ENST00000430071 PMS2P11Q13670 270 aa12.4□□□□□ -0.42
UBE3D-204ENST00000430071 ZNF471Q9BX82 626 aaPredicted RBP12.4□□□□□ -0.42
UBE3D-204ENST00000430071 MRPL32Q9BYC8 188 aaKnown RBP12.4□□□□□ -0.42
UBE3D-204ENST00000430071 H3BQ15 152 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 IGLC2P0DOY2 106 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 PYYP10082 97 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 MEOX2P50222 304 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 RHOBP62745 196 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 SERF2P84101 59 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 C9orf62Q8N4C0 152 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 OR10G4Q8NGN3 311 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 OR10G9Q8NGN4 311 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 OR10G7Q8NGN6 311 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 CSTL1Q9H114 145 aa12.39□□□□□ -0.43
UBE3D-204ENST00000430071 EPPK1P58107 5090 aaKnown RBP12.38□□□□□ -0.43
UBE3D-204ENST00000430071 TRAV8-2A0A0B4J237 113 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 H3BTX0 84 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 ISLRO14498 428 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 SPP1P10451 314 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 CMC4P56277 68 aaPredicted RBP12.38□□□□□ -0.43
UBE3D-204ENST00000430071 PSMG4Q5JS54 123 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 FAM122CQ6P4D5 195 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 RPP25LQ8N5L8 163 aaKnown RBP12.38□□□□□ -0.43
UBE3D-204ENST00000430071 TMEM14CQ9P0S9 112 aa12.38□□□□□ -0.43
UBE3D-204ENST00000430071 PSMB3P49720 205 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 NKX2-5P52952 324 aaPredicted RBP12.37□□□□□ -0.43
UBE3D-204ENST00000430071 SNRPD3P62318 126 aaKnown RBP12.37□□□□□ -0.43
UBE3D-204ENST00000430071 IGFL4Q6B9Z1 124 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 ZNF503Q96F45 646 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 C16orf92Q96LL3 132 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 C20orf173Q96LM9 149 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 HRH4Q9H3N8 390 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 RPRMQ9NS64 109 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 ZNF586Q9NXT0 402 aa12.37□□□□□ -0.43
UBE3D-204ENST00000430071 KNCNA6PVL3 124 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 SLC17A3O00476 420 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 GIG44P09565 113 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-204ENST00000430071 ID1P41134 155 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 DEFB1P60022 68 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 TMEM41BQ5BJD5 291 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 SAT2Q96F10 170 aaPredicted RBP12.36□□□□□ -0.43
UBE3D-204ENST00000430071 PLA2G2EQ9NZK7 142 aa12.36□□□□□ -0.43
UBE3D-204ENST00000430071 A0A1W2PPV4 95 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 CXorf65A6NEN9 183 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 HMGB3O15347 200 aaKnown RBP12.35□□□□□ -0.43
UBE3D-204ENST00000430071 MBP02144 154 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 HLA-DMBP28068 263 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 SAMD13Q5VXD3 122 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 LCN15Q6UWW0 184 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 BAP18Q8IXM2 172 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 RNF182Q8N6D2 247 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 STOML3Q8TAV4 291 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 LINC00052Q96N35 136 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 PAXXQ9BUH6 204 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 OR51M1Q9H341 326 aa12.35□□□□□ -0.43
UBE3D-204ENST00000430071 TRBV19A0A075B6N1 114 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 DEFB4AO15263 64 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 OR7C2O60412 319 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 CA1P00915 261 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-204ENST00000430071 OR10J4P0C629 311 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 SEC11BP0C7V7 166 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 HIST1H1EP10412 219 aaKnown RBP12.34□□□□□ -0.43
UBE3D-204ENST00000430071 CDC34P49427 236 aaPredicted RBP12.34□□□□□ -0.43
UBE3D-204ENST00000430071 GUK1Q16774 197 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 SSX7Q7RTT5 188 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 RAB24Q969Q5 203 aa12.34□□□□□ -0.43
UBE3D-204ENST00000430071 FXYD5Q96DB9 178 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms