RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 ZNF503Q96F45 646 aa5.97□□□□□ -1.45
HMGA1P4-201ENST00000428643 GPR61Q9BZJ8 451 aa5.97□□□□□ -1.45
HMGA1P4-201ENST00000428643 TMPRSS5Q9H3S3 457 aa5.97□□□□□ -1.45
HMGA1P4-201ENST00000428643 TMEM167BQ9NRX6 74 aa5.97□□□□□ -1.45
HMGA1P4-201ENST00000428643 GNG13Q9P2W3 67 aa5.97□□□□□ -1.45
HMGA1P4-201ENST00000428643 TRBV19A0A075B6N1 114 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 A0A087X0K7 114 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 TRAV25A0A0B4J276 109 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 IZUMO1RA6ND01 250 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 SLC17A3O00476 420 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 IFNA1P01562 189 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 NBEAP1P0C6P0 100 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 PSMB3P49720 205 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 MEOX2P50222 304 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 PPT1P50897 306 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 INSL3P51460 131 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 PAFAH1B2P68402 229 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 GUK1Q16774 197 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 FAM90A2PQ658T7 463 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 WFDC9Q8NEX5 89 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 C16orf92Q96LL3 132 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 C17orf77Q96MU5 243 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 SPAG8Q99932 426 aaPredicted RBP5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 MS4A6AQ9H2W1 248 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF586Q9NXT0 402 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 SMAD5-AS1Q9Y6J3 95 aa5.96□□□□□ -1.46
HMGA1P4-201ENST00000428643 OR4C46A6NHA9 309 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 TSPAN4O14817 238 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 ID1P41134 155 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 RANP62826 216 aaKnown RBP5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 CCL20P78556 96 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 PSG9Q00887 426 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 PDE6HQ13956 83 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 HAGHQ16775 308 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 CLLU1Q5K131 121 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 SAMD13Q5VXD3 122 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 CST9LP1Q5W188 147 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 RNF182Q8N6D2 247 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 OR2K2Q8NGT1 345 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 LINC00052Q96N35 136 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 SLC50A1Q9BRV3 221 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 AAMDCQ9H7C9 122 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 MANBALQ9NQG1 85 aa5.95□□□□□ -1.46
HMGA1P4-201ENST00000428643 K7EQG2 157 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ISLRO14498 428 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 PAGE4O60829 102 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF253O75346 499 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 NDUFB4O95168 129 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF688P0C7X2 276 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 BCL2P10415 239 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 SNRPD3P62318 126 aaKnown RBP5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ICAM4Q14773 271 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 PSMG4Q5JS54 123 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 IGFL4Q6B9Z1 124 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 EXOC3-AS1Q8N2X6 119 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF738Q8NE65 137 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 CMTM2Q8TAZ6 248 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 DCANP1Q8TF63 244 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 Q9H3A6 140 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 ZNF331Q9NQX6 463 aaPredicted RBP5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 OTORQ9NRC9 128 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 RPH3ALQ9UNE2 315 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 YTHDF2Q9Y5A9 579 aaKnown RBP5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 VWFP04275 2813 aa5.94□□□□□ -1.46
HMGA1P4-201ENST00000428643 TRAV2A0A0B4J234 112 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 TRAV8-2A0A0B4J237 113 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 A0A1W2PRE2 83 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 FAM74A7A6NL05 159 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 GGTLC3B5MD39 225 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 C11orf94C9JXX5 98 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 SOCS3O14543 225 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 SLC25A5P05141 298 aaKnown RBP5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 HLA-DMBP28068 263 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 ATP5G3P48201 142 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 OXLD1Q5BKU9 147 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 TOR2AQ5JU69 321 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 GTSCR1Q86UQ5 136 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 FAM24BQ8N5W8 94 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 LYPD6BQ8NI32 183 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 SUN5Q8TC36 379 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 EIF5A2Q9GZV4 153 aaKnown RBP5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 ARL2-SNX15V9GYD0 113 aa5.93□□□□□ -1.46
HMGA1P4-201ENST00000428643 LOC102723971A0A1B0GUV8 181 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 PGPA6NDG6 321 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 RBFOX3A6NFN3 312 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 OR11H12B2RN74 326 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 M0R3E3 92 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 WIPF1O43516 503 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 PRB4P10163 310 aaPredicted RBP5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 TAGLN2P37802 199 aaKnown RBP5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 CSN1S1P47710 185 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 CD81P60033 236 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 MEF2BQ02080 365 aaPredicted RBP5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 LYPD1Q8N2G4 141 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 C5orf17Q8NAS9 161 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 RXFP4Q8TDU9 374 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 C20orf173Q96LM9 149 aa5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 NKX6-2Q9C056 277 aaPredicted RBP5.92□□□□□ -1.46
HMGA1P4-201ENST00000428643 MAP6D1Q9H9H5 199 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms