RNA–Protein interactions for RNA: ENST00000428574.6

NR1I3-209, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-209ENST00000428574 SCO2A0A1W2PP80 73 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 RBAKDNA6NC62 111 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 PGPA6NDG6 321 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 CXorf65A6NEN9 183 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 SLC25A5P05141 298 aaKnown RBP6.93□□□□□ -1.3
NR1I3-209ENST00000428574 HOXD3P31249 432 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-209ENST00000428574 RANP62826 216 aaKnown RBP6.93□□□□□ -1.3
NR1I3-209ENST00000428574 GUCA2BQ16661 112 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 TCTEX1D4Q5JR98 221 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 UNQ9165/PRO28630Q6UXU0 137 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 TMEM75Q8N9X5 138 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 CMTM2Q8TAZ6 248 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF331Q9NQX6 463 aaPredicted RBP6.93□□□□□ -1.3
NR1I3-209ENST00000428574 BIN3Q9NQY0 253 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 SIGLEC8Q9NYZ4 499 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 PEMTQ9UBM1 199 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 SMPXQ9UHP9 88 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 RNF114Q9Y508 228 aa6.93□□□□□ -1.3
NR1I3-209ENST00000428574 ANK3Q12955 4377 aaKnown RBP6.93□□□□□ -1.3
NR1I3-209ENST00000428574 SONP18583 2426 aaKnown RBP6.92□□□□□ -1.3
NR1I3-209ENST00000428574 TRAV2A0A0B4J234 112 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 IGHV3-35A0A0C4DH35 117 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 M0QZ24 198 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 TSPAN4O14817 238 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 PPP1R2P9O14990 202 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 TCRAP04437 139 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 AKR1C3P42330 323 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 RPL35P42766 123 aaKnown RBP6.92□□□□□ -1.3
NR1I3-209ENST00000428574 CSN1S1P47710 185 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 TMEM183BQ1AE95 376 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 AWAT1Q58HT5 328 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 LCNL1Q6ZST4 164 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 BLNKQ8WV28 456 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 DPF1Q92782 380 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 RHPN1-AS1Q9BWJ2 59 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 CTDSP1Q9GZU7 261 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 TUBA4BQ9H853 241 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 NRN1Q9NPD7 142 aa6.92□□□□□ -1.3
NR1I3-209ENST00000428574 NSD1Q96L73 2696 aaPredicted RBP6.92□□□□□ -1.3
NR1I3-209ENST00000428574 IGHV4OR15-8A0A075B7B6 117 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 A0A087WW49 117 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 TMEM213A2RRL7 107 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF785A8K8V0 405 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 ISLRO14498 428 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 CHEK1O14757 476 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 MT-ND4LP03901 98 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 GNG4P50150 75 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 CEBPGP53567 150 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 FOXL1Q12952 345 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 LINC01551Q86U37 167 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 NDUFA11Q86Y39 141 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 KLHL30-AS1Q8NEE0 82 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 OR1N2Q8NGR9 330 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 ANAPC16Q96DE5 110 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 PPP1R14DQ9NXH3 145 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 MLXQ9UH92 298 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 ZFP30Q9Y2G7 519 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 SMAD5-AS1Q9Y6J3 95 aa6.91□□□□□ -1.3
NR1I3-209ENST00000428574 FLNBO75369 2602 aaKnown RBP6.9□□□□□ -1.3
NR1I3-209ENST00000428574 HIVEP1P15822 2718 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 TRBV20OR9-2A0A075B6H5 130 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 C7orf77A4D0Y5 90 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 M0R036 132 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 SLC17A3O00476 420 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 LTAP01374 205 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 UBE2G1P62253 170 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 RPL23P62829 140 aaKnown RBP6.9□□□□□ -1.3
NR1I3-209ENST00000428574 ZNF674Q2M3X9 581 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 COX8CQ7Z4L0 72 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 IGF2BP2-AS1Q96M15 143 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 OR5B12Q96R08 314 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 SMCO4Q9NRQ5 59 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 LENEPQ9Y5L5 61 aa6.9□□□□□ -1.3
NR1I3-209ENST00000428574 TRBV7-9A0A0J9YWB2 115 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 C2orf70A6NJV1 201 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 DIRC3C9JPN6 131 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 SOCS3O14543 225 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 APOHP02749 345 aaPredicted RBP6.89□□□□□ -1.31
NR1I3-209ENST00000428574 CBLN1P23435 193 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 PSG3Q16557 428 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 LINC01559Q495D7 138 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 TM4SF20Q53R12 229 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 CENPWQ5EE01 88 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 KHDC1LQ5JSQ8 128 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 FAM231DQ6ZW35 169 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 OR11H1Q8NG94 326 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 OR9G4Q8NGQ1 327 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 ISOC2Q96AB3 205 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 BTF3L4Q96K17 158 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 C17orf77Q96MU5 243 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 IMMP2LQ96T52 175 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 DERL1Q9BUN8 251 aa6.89□□□□□ -1.31
NR1I3-209ENST00000428574 MTORP42345 2549 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 IGHV3OR16-8A0A075B7F1 116 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 TRAV25A0A0B4J276 109 aa6.88□□□□□ -1.31
NR1I3-209ENST00000428574 CCL24O00175 119 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms