RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 MANBALQ9NQG1 85 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 GNG13Q9P2W3 67 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 NOTCH3Q9UM47 2321 aa9.42□□□□□ -0.9
TRIM39-207ENST00000428404 PKD1L1Q8TDX9 2849 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 RAB19A4D1S5 217 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 RBFOX3A6NFN3 312 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 FAM74A7A6NL05 159 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 H3BTX0 84 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 SLC17A3O00476 420 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 SOCS3O14543 225 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 PAGE4O60829 102 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 BCL2P10415 239 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 TAGLN2P37802 199 aaKnown RBP9.41□□□□□ -0.9
TRIM39-207ENST00000428404 ZNF506Q5JVG8 444 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 CCDC28AQ8IWP9 274 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 LYPD1Q8N2G4 141 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 DCANP1Q8TF63 244 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 BLNKQ8WV28 456 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 RARRES2Q99969 163 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 NRN1Q9NPD7 142 aa9.41□□□□□ -0.9
TRIM39-207ENST00000428404 TRAV8-2A0A0B4J237 113 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 TRAV25A0A0B4J276 109 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 LOC102723971A0A1B0GUV8 181 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 TSPAN4O14817 238 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 IFNA1P01562 189 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 IGLV1-51P01701 117 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 UBE2G2P60604 165 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 RANP62826 216 aaKnown RBP9.4□□□□□ -0.9
TRIM39-207ENST00000428404 ICAM4Q14773 271 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 HAGHQ16775 308 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 CD300EQ496F6 205 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-207ENST00000428404 NKX6-2Q9C056 277 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-207ENST00000428404 MS4A6AQ9H2W1 248 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 ZNF331Q9NQX6 463 aaPredicted RBP9.4□□□□□ -0.9
TRIM39-207ENST00000428404 VAX2Q9UIW0 290 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 SELENOKQ9Y6D0 94 aa9.4□□□□□ -0.9
TRIM39-207ENST00000428404 CMYA5Q8N3K9 4069 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 TRAV2A0A0B4J234 112 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 GGTLC3B5MD39 225 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 NDUFS6O75380 124 aaKnown RBP9.39□□□□□ -0.91
TRIM39-207ENST00000428404 SAP30O75446 220 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 RPL11P62913 178 aaKnown RBP9.39□□□□□ -0.91
TRIM39-207ENST00000428404 SRSF3P84103 164 aaKnown RBP9.39□□□□□ -0.91
TRIM39-207ENST00000428404 KRTAP21-3Q3LHN1 58 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 TMEM61Q8N0U2 210 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 EIF4E3Q8N5X7 224 aaKnown RBP9.39□□□□□ -0.91
TRIM39-207ENST00000428404 OR2K2Q8NGT1 345 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 DYNLRB2Q8TF09 96 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 TXNDC17Q9BRA2 123 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 SLC50A1Q9BRV3 221 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 Q9H3A6 140 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 OTORQ9NRC9 128 aa9.39□□□□□ -0.91
TRIM39-207ENST00000428404 K7EQG2 157 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 INSL3P51460 131 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 CD81P60033 236 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 SUMO1P63165 101 aaKnown RBP9.38□□□□□ -0.91
TRIM39-207ENST00000428404 PSG9Q00887 426 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 MEF2BQ02080 365 aaPredicted RBP9.38□□□□□ -0.91
TRIM39-207ENST00000428404 NDUFA5Q16718 116 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 TOR2AQ5JU69 321 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 SAMD13Q5VXD3 122 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 CST9LP1Q5W188 147 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 COMMD7Q86VX2 200 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 GBGT1Q8N5D6 347 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 SMDT1Q9H4I9 107 aa9.38□□□□□ -0.91
TRIM39-207ENST00000428404 IZUMO1RA6ND01 250 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 PGPA6NDG6 321 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 C9JQL5 133 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 C11orf94C9JXX5 98 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 ISLRO14498 428 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 WIPF1O43516 503 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 CD33P20138 364 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 ATP5G3P48201 142 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 C9orf66Q5T8R8 295 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 IGFL4Q6B9Z1 124 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 RBPMS2Q6ZRY4 209 aaKnown RBP9.37□□□□□ -0.91
TRIM39-207ENST00000428404 ARL6IP6Q8N6S5 226 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 RXFP4Q8TDU9 374 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 MCRIP2Q9BUT9 160 aaKnown RBP9.37□□□□□ -0.91
TRIM39-207ENST00000428404 EIF5A2Q9GZV4 153 aaKnown RBP9.37□□□□□ -0.91
TRIM39-207ENST00000428404 CLEC5AQ9NY25 188 aa9.37□□□□□ -0.91
TRIM39-207ENST00000428404 ZNF256Q9Y2P7 627 aaPredicted RBP9.37□□□□□ -0.91
TRIM39-207ENST00000428404 IGKV3-7A0A075B6H7 116 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 HLA-DMBP28068 263 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 PAFAH1B2P68402 229 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 PEA15Q15121 130 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 UQCC3Q6UW78 93 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 SLC7A5P1Q8MH63 180 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 MRPL53Q96EL3 112 aaKnown RBP9.36□□□□□ -0.91
TRIM39-207ENST00000428404 C16orf92Q96LL3 132 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 SPAG8Q99932 426 aaPredicted RBP9.36□□□□□ -0.91
TRIM39-207ENST00000428404 TCEAL7Q9BRU2 100 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 EPDR1Q9UM22 224 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 PRELID1Q9Y255 219 aa9.36□□□□□ -0.91
TRIM39-207ENST00000428404 SORL1Q92673 2214 aa9.35□□□□□ -0.91
TRIM39-207ENST00000428404 M0R3E3 92 aa9.35□□□□□ -0.91
TRIM39-207ENST00000428404 DNASE2O00115 360 aaPredicted RBP9.35□□□□□ -0.91
TRIM39-207ENST00000428404 PDE6DO43924 150 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms