RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 UTF1Q5T230 341 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 LEAP2Q969E1 77 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 CARD19Q96LW7 228 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 SLC25A39Q9BZJ4 359 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-206ENST00000428313 HEATR1Q9H583 2144 aaKnown RBP12.76□□□□□ -0.37
C9orf3-206ENST00000428313 IGKV1D-17A0A075B6S4 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE12JA6NER3 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 HOXA3O43365 443 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE7O76087 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 IGKV1-16P04430 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 PRSS1P07477 247 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 ZNF688P0C7X2 276 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE12FP0CL80 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE12GP0CL81 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE12IP0CL82 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 CKS2P33552 79 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 GAGE4Q13068 117 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 WFDC3Q8IUB2 231 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 MAPKAPK5-AS1Q8N8E1 139 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 OR10X1Q8NGY0 326 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 TMEM14CQ9P0S9 112 aa12.76□□□□□ -0.37
C9orf3-206ENST00000428313 A0A1W2PQM1 296 aa12.75□□□□□ -0.37
C9orf3-206ENST00000428313 IL4P05112 153 aa12.75□□□□□ -0.37
C9orf3-206ENST00000428313 FAM169BQ8N8A8 192 aa12.75□□□□□ -0.37
C9orf3-206ENST00000428313 TPPP3Q9BW30 176 aa12.75□□□□□ -0.37
C9orf3-206ENST00000428313 TMEM213A2RRL7 107 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 RHODO00212 210 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 IL11RAQ14626 422 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 LYZL1Q6UWQ5 148 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 SMIM20Q8N5G0 67 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 MAP1LC3AQ9H492 121 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 ZNF71Q9NQZ8 489 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-206ENST00000428313 MRPL36Q9P0J6 103 aaKnown RBP12.74□□□□□ -0.37
C9orf3-206ENST00000428313 AGRNO00468 2067 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 CCL11P51671 97 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
C9orf3-206ENST00000428313 Q71RC1 249 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-206ENST00000428313 TMEM8BA6NDV4 472 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 H3BTX0 84 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 LEPP41159 167 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 SBSPONQ8IVN8 264 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 HARBI1Q96MB7 349 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 FOXC2Q99958 501 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 FAM90A27PA6NNH2 459 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 WT1-ASQ06250 92 aa12.73□□□□□ -0.37
C9orf3-206ENST00000428313 NXT2Q9NPJ8 142 aaKnown RBP12.73□□□□□ -0.37
C9orf3-206ENST00000428313 SRRM5B3KS81 715 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 CNIH1O95406 144 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 BRI3O95415 125 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 IGHG4P01861 327 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 CLEC3BP05452 202 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 CRIP1P50238 77 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 MZT1Q08AG7 82 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 NDUFV3P56181 108 aaKnown RBP12.72□□□□□ -0.37
C9orf3-206ENST00000428313 C12orf49Q9H741 205 aa12.72□□□□□ -0.37
C9orf3-206ENST00000428313 DOCK7Q96N67 2140 aa12.71□□□□□ -0.37
C9orf3-206ENST00000428313 NCBP2LA6PVI3 153 aaKnown RBP12.71□□□□□ -0.37
C9orf3-206ENST00000428313 FABP5P3A8MUU1 101 aa12.71□□□□□ -0.37
C9orf3-206ENST00000428313 FOLR3P41439 243 aa12.71□□□□□ -0.37
C9orf3-206ENST00000428313 TMEM30BQ3MIR4 351 aa12.71□□□□□ -0.37
C9orf3-206ENST00000428313 GUSBP11Q6P575 273 aa12.71□□□□□ -0.37
C9orf3-206ENST00000428313 TIMM8AO60220 97 aaPredicted RBP12.71□□□□□ -0.38
C9orf3-206ENST00000428313 IGHV3-48P01763 117 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 PIP4P1Q86T03 277 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 EXOC3-AS1Q8N2X6 119 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 TMEM167AQ8TBQ9 72 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 RPEQ96AT9 228 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 HIGD1AQ9Y241 93 aa12.71□□□□□ -0.38
C9orf3-206ENST00000428313 LY6G6EA0A0G2JKS1 128 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 CENPVL3A0A0U1RRI6 287 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 SMKR1H3BMG3 65 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 UBE2D3P61077 147 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 UBE2D2P62837 147 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 FAM173AQ9BQD7 235 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 U3KQA8 63 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 PCNX2A6NKB5 2137 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 DSCAML1Q8TD84 2053 aa12.7□□□□□ -0.38
C9orf3-206ENST00000428313 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 TRAV40A0A0B4J280 105 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 CGB1A6NKQ9 187 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 E7EUB6 86 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 ARL3P36405 182 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 PSMB2P49721 201 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 DIAPH2-AS1Q14236 149 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 Q6Q795 121 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 TMEM160Q9NX00 188 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 ASIPP42127 132 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 Q0VFX4 171 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 GAGE2BQ13066 116 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 GAGE2EQ4V326 116 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 PVRIGQ6DKI7 326 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 GAGE2DQ9UEU5 116 aa12.69□□□□□ -0.38
C9orf3-206ENST00000428313 DOCK10Q96BY6 2186 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 MYMXA0A1B0GTQ4 84 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 PLNP26678 52 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 ZNRF1Q8ND25 227 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 HIF1ANQ9NWT6 349 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 A0A087WX48 190 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 A8MWV9 139 aa12.68□□□□□ -0.38
C9orf3-206ENST00000428313 CCDC179H3BU77 68 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms